RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 IGSF9Q9P2J2 1179 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 HS3ST4Q9Y661 456 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 SDK1Q7Z5N4 2213 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 NR5A2O00482 541 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 BIRC5O15392 142 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 DLX3O60479 287 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 DNAJA2O60884 412 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 RHOBTB1O94844 696 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 MLNP12872 115 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 RAB10P61026 200 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 STX1BP61266 288 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 NIPAL4Q0D2K0 466 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 MED21Q13503 144 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 SH2D5Q6ZV89 423 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 MAVSQ7Z434 540 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 AMIGO2Q86SJ2 522 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 KBTBD2Q8IY47 623 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 LPCAT1Q8NF37 534 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 TUBGCP3Q96CW5 907 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 RTP4Q96DX8 246 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 EBF3Q9H4W6 596 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 PIDD1Q9HB75 910 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 CDH22Q9UJ99 828 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 PCDHGC4Q9Y5F7 938 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 hCG_2014768A0A024R1R8 64 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 YWHAQP27348 245 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 RPS24P62847 133 aaKnown RBP11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 PAFAH1B3Q15102 231 aaKnown RBP11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 DBN1Q16643 649 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 UGP2Q16851 508 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 DCLRE1AQ6PJP8 1040 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 ZNF598Q86UK7 904 aaKnown RBP11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 ZC3HC1Q86WB0 502 aaKnown RBP11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 DENND1CQ8IV53 801 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 KYQ8NBH2 561 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 CDC26Q8NHZ8 85 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 DNAJC1Q96KC8 554 aaKnown RBP11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 SENP6Q9GZR1 1112 aaPredicted RBP11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 TIMM22Q9Y584 194 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 SNX13Q9Y5W8 968 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 USP3Q9Y6I4 520 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 HDAC3O15379 428 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 IRAK2O43187 625 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 DUSP11O75319 330 aaKnown RBP11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 KATNA1O75449 491 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 STAU1O95793 577 aaKnown RBP11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 SERPINH1P50454 418 aaKnown RBP11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 FCGRTP55899 365 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 ECT2LQ008S8 904 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 RGMBQ6NW40 437 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 ST13P5Q8NFI4 369 aaPredicted RBP11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 TRPC4APQ8TEL6 797 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 SORT1Q99523 831 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 VCX3BQ9H321 246 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 RHOJQ9H4E5 214 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 EGFL7Q9UHF1 273 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 TBKBP1A7MCY6 615 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 GUCA1CO95843 209 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 HADHAP40939 763 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 CCNHP51946 323 aaPredicted RBP11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 AQP4P55087 323 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 PTK2BQ14289 1009 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 BNC2Q6ZN30 1099 aaPredicted RBP11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 ZNF467Q7Z7K2 595 aaPredicted RBP11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 AFAP1L2Q8N4X5 818 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 MAGEC3Q8TD91 643 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 EME1Q96AY2 570 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 SCLYQ96I15 445 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 MRPL1Q9BYD6 325 aaKnown RBP11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 MID1IP1Q9NPA3 183 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 LNPEPQ9UIQ6 1025 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 POMPQ9Y244 141 aa11.04□□□□□ -0.64
DNMT3A-203ENST00000380746 A0A0D9SEW6 157 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 RBM47A0AV96 593 aaKnown RBP11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 E5RI56 91 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 PPP6CO00743 305 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 GPR39O43194 453 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 BAIAP3O94812 1187 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 MPOP05164 745 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 ARSDP51689 593 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 LPIN1Q14693 890 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 KRT72Q14CN4 511 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 LCA5Q86VQ0 697 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 SPDYE1Q8NFV5 336 aaPredicted RBP11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 NMD3Q96D46 503 aaKnown RBP11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 ZNF333Q96JL9 665 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 RPL10LQ96L21 214 aaKnown RBP11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 SERPINI1Q99574 410 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 CCDC106Q9BWC9 280 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 APOL5Q9BWW9 433 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 WDR41Q9HAD4 459 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 OSER1Q9NX31 292 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 HACD3Q9P035 362 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 GIT1Q9Y2X7 761 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 PTCH2Q9Y6C5 1203 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 TLR5O60602 858 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 NDUFS3O75489 264 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 CTPS1P17812 591 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 XRCC1P18887 633 aaPredicted RBP11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 GABRB3P28472 473 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms