RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 MMP20O60882 483 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 USP12O75317 370 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 MPOP05164 745 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 THOP1P52888 689 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 RHOAP61586 193 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 MYL5Q02045 173 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 UBXN1Q04323 297 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 RAD51Q06609 339 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 CCDC173Q0VFZ6 552 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 INO80DQ53TQ3 878 aaPredicted RBP17.07■□□□□ 0.32
SMN2-201ENST00000380741 PPP1R15BQ5SWA1 713 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 GUSBP11Q6P575 273 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 EXOC2Q96KP1 924 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 FCRL3Q96P31 734 aaPredicted RBP17.07■□□□□ 0.32
SMN2-201ENST00000380741 UBL7Q96S82 380 aaPredicted RBP17.07■□□□□ 0.32
SMN2-201ENST00000380741 EPAS1Q99814 870 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 AGPAT1Q99943 283 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 PNMA8BQ9ULN7 279 aaPredicted RBP17.07■□□□□ 0.32
SMN2-201ENST00000380741 FZD10Q9ULW2 581 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 MFHAS1Q9Y4C4 1052 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 ATMQ13315 3056 aa17.07■□□□□ 0.32
SMN2-201ENST00000380741 CPED1A4D0V7 1026 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 ANKRD62A6NC57 917 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 WASH4PA8MWX3 477 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 INSIG1O15503 277 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 TM7SF2O76062 418 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 TIMP2P16035 220 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 TGM2P21980 687 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 YBEYP58557 167 aaPredicted RBP17.06■□□□□ 0.32
SMN2-201ENST00000380741 GABREP78334 506 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 SERINC3Q13530 473 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 PTK2BQ14289 1009 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 PARP15Q460N3 678 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 PRRT3Q5FWE3 981 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 EFL1Q7Z2Z2 1120 aaKnown RBP17.06■□□□□ 0.32
SMN2-201ENST00000380741 CXorf40AQ8TE69 158 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 BTN2A2Q8WVV5 523 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 ERGIC2Q96RQ1 377 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 IL12RB2Q99665 862 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 WRAP53Q9BUR4 548 aaKnown RBP17.06■□□□□ 0.32
SMN2-201ENST00000380741 CATSPERBQ9H7T0 1116 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 MBNL1Q9NR56 388 aaKnown RBP17.06■□□□□ 0.32
SMN2-201ENST00000380741 NCKIPSDQ9NZQ3 722 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 SPASTQ9UBP0 616 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 DKK3Q9UBP4 350 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 LHX3Q9UBR4 397 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 APOBEC3BQ9UH17 382 aaKnown RBP17.06■□□□□ 0.32
SMN2-201ENST00000380741 SALL4Q9UJQ4 1053 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 ANKRD36A6QL64 1941 aa17.06■□□□□ 0.32
SMN2-201ENST00000380741 TPP1O14773 563 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 GCATO75600 419 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 PIGNO95427 931 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 AIF1P55008 147 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 YPEL5P62699 121 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 TLE3Q04726 772 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 C1orf61Q13536 156 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 KLHL40Q2TBA0 621 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 SASS6Q6UVJ0 657 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 APTXQ7Z2E3 356 aaKnown RBP17.05■□□□□ 0.32
SMN2-201ENST00000380741 SPACA3Q8IXA5 215 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 PHACTR4Q8IZ21 702 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 UMODL1-AS1Q8N2C9 162 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 TP53I13Q8NBR0 393 aaPredicted RBP17.05■□□□□ 0.32
SMN2-201ENST00000380741 ZNF578Q96N58 590 aaPredicted RBP17.05■□□□□ 0.32
SMN2-201ENST00000380741 LGMNQ99538 433 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 CNPY3Q9BT09 278 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 LRRC61Q9BV99 259 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 BOCQ9BWV1 1114 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 C1QTNF7Q9BXJ2 289 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 CPEB1Q9BZB8 566 aaKnown RBP17.05■□□□□ 0.32
SMN2-201ENST00000380741 HSD3B7Q9H2F3 369 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 ANO10Q9NW15 660 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 LRP4O75096 1905 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 KIF26BQ2KJY2 2108 aa17.05■□□□□ 0.32
SMN2-201ENST00000380741 EME2A4GXA9 379 aaPredicted RBP17.04■□□□□ 0.32
SMN2-201ENST00000380741 LRRC10BA6NIK2 292 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 FGF10O15520 208 aaPredicted RBP17.04■□□□□ 0.32
SMN2-201ENST00000380741 LZTS3O60299 673 aaPredicted RBP17.04■□□□□ 0.32
SMN2-201ENST00000380741 DXOO77932 396 aaKnown RBP17.04■□□□□ 0.32
SMN2-201ENST00000380741 CDK11BP21127 795 aaKnown RBP17.04■□□□□ 0.32
SMN2-201ENST00000380741 EIF4A3P38919 411 aaKnown RBP17.04■□□□□ 0.32
SMN2-201ENST00000380741 LSSP48449 732 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 ADKP55263 362 aaKnown RBP17.04■□□□□ 0.32
SMN2-201ENST00000380741 PCBP4P57723 403 aaKnown RBP17.04■□□□□ 0.32
SMN2-201ENST00000380741 OGDHQ02218 1023 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 IRF4Q15306 451 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 CYTH1Q15438 398 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 NR0B2Q15466 257 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 STX1AQ16623 288 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 ISXQ2M1V0 245 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 DCUN1D2Q6PH85 259 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 CRTC1Q6UUV9 634 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 MACC1Q6ZN28 852 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 MCOLN2Q8IZK6 566 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 LSMEM2Q8N112 164 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 ZNF248Q8NDW4 579 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 NAF1Q96HR8 494 aaKnown RBP17.04■□□□□ 0.32
SMN2-201ENST00000380741 HIC2Q96JB3 615 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 NCAPGQ9BPX3 1015 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 POLR1BQ9H9Y6 1135 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms