RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 RIMS3Q9UJD0 308 aa16.48■□□□□ 0.23
VPS16-203ENST00000380469 NEU3Q9UQ49 428 aa16.48■□□□□ 0.23
VPS16-203ENST00000380469 STX16-NPEPL1H3BU86 382 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 IRAK2O43187 625 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 IGLV3-25P01717 112 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 HLA-DQB2P05538 268 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 DPP6P42658 865 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 STX5Q13190 355 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 PTK2BQ14289 1009 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 CSHL1Q14406 222 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 UPP1Q16831 310 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 AGAP9Q5VTM2 703 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 BTBD8Q5XKL5 378 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 KLC3Q6P597 504 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 KIAA0408Q6ZU52 694 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 SPATA24Q86W54 205 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 RTP3Q9BQQ7 232 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 ABCC13Q9NSE7 274 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 TBC1D13Q9NVG8 400 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 GIT1Q9Y2X7 761 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 TRIM38O00635 465 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 HSPA1AP0DMV8 641 aaKnown RBP16.47■□□□□ 0.23
VPS16-203ENST00000380469 HSPA1BP0DMV9 641 aaKnown RBP16.47■□□□□ 0.23
VPS16-203ENST00000380469 HNRNPLP14866 589 aaKnown RBP eCLIP16.47■□□□□ 0.23
VPS16-203ENST00000380469 GRIA2P42262 883 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 HSPA13P48723 471 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 MAP2K5Q13163 448 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 MAPRE2Q15555 327 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 CNSTQ6PJW8 725 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 RANBP10Q6VN20 620 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 CALML6Q8TD86 181 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 ZNF419Q96HQ0 510 aaPredicted RBP16.47■□□□□ 0.23
VPS16-203ENST00000380469 FCRL2Q96LA5 508 aaPredicted RBP16.47■□□□□ 0.23
VPS16-203ENST00000380469 MRGPRX2Q96LB1 330 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 PAAF1Q9BRP4 392 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 ATXN3LQ9H3M9 355 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 SUDS3Q9H7L9 328 aaPredicted RBP16.47■□□□□ 0.23
VPS16-203ENST00000380469 IGSF5Q9NSI5 407 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 FIS1Q9Y3D6 152 aa16.47■□□□□ 0.23
VPS16-203ENST00000380469 CRTAMO95727 393 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 HOXC13P31276 330 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 ATXN3P54252 364 aaPredicted RBP16.46■□□□□ 0.23
VPS16-203ENST00000380469 SH3BGRP55822 239 aaPredicted RBP16.46■□□□□ 0.23
VPS16-203ENST00000380469 EIF4EBP2Q13542 120 aaPredicted RBP16.46■□□□□ 0.23
VPS16-203ENST00000380469 RNF135Q8IUD6 432 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 SCAMP5Q8TAC9 235 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 NAT14Q8WUY8 206 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 TSPAN17Q96FV3 270 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 FLRT1Q9NZU1 646 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.46■□□□□ 0.23
VPS16-203ENST00000380469 TRPV2Q9Y5S1 764 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 FNDC1Q4ZHG4 1894 aaPredicted RBP16.46■□□□□ 0.23
VPS16-203ENST00000380469 ACOT8O14734 319 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 TCN1P20061 433 aaPredicted RBP16.46■□□□□ 0.23
VPS16-203ENST00000380469 CHRNA4P43681 627 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 RAB27AP51159 221 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 PSME3P61289 254 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 PSMD5Q16401 504 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 MORN1Q5T089 497 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 GK5Q6ZS86 529 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 SATL1Q86VE3 508 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 LRRC49Q8IUZ0 686 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 PELI3Q8N2H9 469 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 PKP2Q99959 881 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 CYP4F12Q9HCS2 524 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 AP4B1Q9Y6B7 739 aa16.46■□□□□ 0.23
VPS16-203ENST00000380469 PRSS51A0A1B0GVH4 220 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 HEATR9A2RTY3 570 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 NEMP2A6NFY4 417 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 KCNU1A8MYU2 1149 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 GPC4O75487 556 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 IPO13O94829 963 aaKnown RBP16.45■□□□□ 0.22
VPS16-203ENST00000380469 RBP1P09455 135 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 LTA4HP09960 611 aaKnown RBP16.45■□□□□ 0.22
VPS16-203ENST00000380469 HOXC8P31273 242 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 CLCN2P51788 898 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 SULT2A1Q06520 285 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 PDAP1Q13442 181 aaKnown RBP16.45■□□□□ 0.22
VPS16-203ENST00000380469 SQLEQ14534 574 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 PCSK7Q16549 785 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 FSCN1Q16658 493 aaKnown RBP16.45■□□□□ 0.22
VPS16-203ENST00000380469 TECRLQ5HYJ1 363 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 MANEALQ5VSG8 457 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 AGMOQ6ZNB7 445 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 LILRA2Q8N149 483 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 SPPL2BQ8TCT7 592 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 EPB41L1Q9H4G0 881 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 TMLHEQ9NVH6 421 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 SFMBT1Q9UHJ3 866 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 DSEQ9UL01 958 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 Q9Y3F1 56 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 UBDO15205 165 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 B3GAT3O94766 335 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 RPL5P46777 297 aaKnown RBP16.45■□□□□ 0.22
VPS16-203ENST00000380469 CLCN5P51795 746 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 WNT3AP56704 352 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 PFKPQ01813 784 aa16.45■□□□□ 0.22
VPS16-203ENST00000380469 MAPRE1Q15691 268 aaKnown RBP16.45■□□□□ 0.22
VPS16-203ENST00000380469 PAN2Q504Q3 1202 aaKnown RBP16.45■□□□□ 0.22
VPS16-203ENST00000380469 RBM20Q5T481 1227 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms