RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 MROH6A6NGR9 719 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 BIRC5O15392 142 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 PAPSS2O95340 614 aaPredicted RBP20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 GSRP00390 522 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 MZF1P28698 734 aaPredicted RBP20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 SLC7A9P82251 487 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 OVGP1Q12889 678 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 UGP2Q16851 508 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 RNF43Q68DV7 783 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 TRIM42Q8IWZ5 723 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 FAM217AQ8IXS0 508 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 C7orf61Q8IZ16 206 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 PLD6Q8N2A8 252 aaKnown RBP20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 SPPL3Q8TCT6 385 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 POF1BQ8WVV4 589 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 E2F7Q96AV8 911 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 RMDN2Q96LZ7 410 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 TMEM216Q9P0N5 145 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 LSM7Q9UK45 103 aaKnown RBP20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 SLC39A10Q9ULF5 831 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 A0A096LPK6 155 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 TYW5A2RUC4 315 aaKnown RBP20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 SNAP91O60641 907 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 PLIN3O60664 434 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 LUC7L3O95232 432 aaKnown RBP20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 CD160O95971 181 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 PRKCGP05129 697 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 MPOP05164 745 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 SYN1P17600 705 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 HLA-DPA1P20036 260 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 CDC25CP30307 473 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 SLC1A2P43004 574 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 GALNT3Q14435 633 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 NEPROQ6NW34 567 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 HTR3DQ70Z44 454 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 OR13J1Q8NGT2 312 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 PHOSPHO2Q8TCD6 241 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 BHMTQ93088 406 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 FEM1AQ9BSK4 669 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 ZNF358Q9NW07 568 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 CFAP97Q9P2B7 532 aa20.02■□□□□ 0.8
PDLIM5-205ENST00000380180 TRAV19A0A0A6YYK7 116 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 INSIG1O15503 277 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 LDB2O43679 373 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 FGF1P05230 155 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 C2P06681 752 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 CR2P20023 1033 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 HADHAP40939 763 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 CLCN4P51793 760 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 CHI3L2Q15782 390 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 LACTB2Q53H82 288 aaPredicted RBP20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 PPM1LQ5SGD2 360 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 FYB2Q5VWT5 728 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 CES4AQ5XG92 561 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 ZNF470Q6ECI4 717 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 LINGO4Q6UY18 593 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 RNF135Q8IUD6 432 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 C2CD4AQ8NCU7 369 aaPredicted RBP20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 WFDC5Q8TCV5 224 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 NOTCH4Q99466 2003 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 FAM167BQ9BTA0 163 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 SLC46A2Q9BY10 475 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 NPHS2Q9NP85 383 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 ASAH2Q9NR71 780 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 HCFC1R1Q9NWW0 138 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 SH3BP1Q9Y3L3 701 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 KCTD3Q9Y597 815 aa20.02■□□□□ 0.79
PDLIM5-205ENST00000380180 CCDC195A0A1B0GUA6 201 aa20.01■□□□□ 0.79
PDLIM5-205ENST00000380180 ZMPSTE24O75844 475 aa20.01■□□□□ 0.79
PDLIM5-205ENST00000380180 TMPRSS15P98073 1019 aa20.01■□□□□ 0.79
PDLIM5-205ENST00000380180 BST1Q10588 318 aa20.01■□□□□ 0.79
PDLIM5-205ENST00000380180 NLRP9Q7RTR0 991 aa20.01■□□□□ 0.79
PDLIM5-205ENST00000380180 BBS7Q8IWZ6 715 aa20.01■□□□□ 0.79
PDLIM5-205ENST00000380180 GCNAQ96QF7 691 aa20.01■□□□□ 0.79
PDLIM5-205ENST00000380180 TRIB3Q96RU7 358 aa20.01■□□□□ 0.79
PDLIM5-205ENST00000380180 SCUBE2Q9NQ36 999 aa20.01■□□□□ 0.79
PDLIM5-205ENST00000380180 TLR9Q9NR96 1032 aa20.01■□□□□ 0.79
PDLIM5-205ENST00000380180 FBXO5Q9UKT4 447 aa20.01■□□□□ 0.79
PDLIM5-205ENST00000380180 OR51B4Q9Y5P0 310 aa20.01■□□□□ 0.79
PDLIM5-205ENST00000380180 PROCP04070 461 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 SAT1P21673 171 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 CCR2P41597 374 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 CSRP3P50461 194 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 IRF9Q00978 393 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 SLC14A2Q15849 920 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 FASTKD1Q53R41 847 aaKnown RBP20■□□□□ 0.79
PDLIM5-205ENST00000380180 ATG16L1Q676U5 607 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 SPRED2Q7Z698 418 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 BLOC1S5Q8TDH9 187 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 MICAL1Q8TDZ2 1067 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 DDI1Q8WTU0 396 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 C10orf82Q8WW14 230 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 C17orf80Q9BSJ5 609 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 VPS28Q9UK41 221 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 CHKBQ9Y259 395 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 LINC01553A4QN01 128 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 HAUS5O94927 633 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 NDST3O95803 873 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 IL1BP01584 269 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 GSTA1P08263 222 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms