RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 ZFP69Q49AA0 526 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 PIGGQ5H8A4 983 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 FSCBQ5H9T9 825 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 DESI1Q6ICB0 168 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 SLFN12LQ6IEE8 588 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 UNC45BQ8IWX7 931 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 CDC26Q8NHZ8 85 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 TRIM15Q9C019 465 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 GPR88Q9GZN0 384 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 C20orf96Q9NUD7 363 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-201ENST00000379989 SIRPGQ9P1W8 387 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 PRPF19Q9UMS4 504 aaKnown RBP7.55□□□□□ -1.2
CDKL5-201ENST00000379989 DIMT1Q9UNQ2 313 aaKnown RBP7.55□□□□□ -1.2
CDKL5-201ENST00000379989 CENPXA8MT69 81 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 A8MUA0 341 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 FAM25AB3EWG3 89 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 FAM25CB3EWG5 89 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 FAM25GB3EWG6 89 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 CYB561D2O14569 222 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 DNALI1O14645 258 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-201ENST00000379989 ATG13O75143 517 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 OLFM2O95897 454 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 FTLP02792 175 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-201ENST00000379989 CD1EP15812 388 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 ITGB5P18084 799 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 ALAS2P22557 587 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 ABCG1P45844 678 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 ARHGDIAP52565 204 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 RPS6P62753 249 aaKnown RBP7.55□□□□□ -1.2
CDKL5-201ENST00000379989 IL1RL1Q01638 556 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 CEACAM7Q14002 265 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 SURF1Q15526 300 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 ESCO2Q56NI9 601 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 BRDTQ58F21 947 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-201ENST00000379989 XKR3Q5GH77 459 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 DCAF17Q5H9S7 520 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-201ENST00000379989 ODR4Q5SWX8 454 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 GTF2IRD2BQ6EKJ0 949 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 ZNF438Q7Z4V0 828 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 GTF2IRD2Q86UP8 949 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 LACC1Q8IV20 430 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 LGI2Q8N0V4 545 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 RNF148Q8N7C7 305 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 LRRC20Q8TCA0 184 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 SLC44A1Q8WWI5 657 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 SLC35C1Q96A29 364 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 FIZ1Q96SL8 496 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 RTKNQ9BST9 563 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 GHITMQ9H3K2 345 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 FANCFQ9NPI8 374 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 HOMER2Q9NSB8 354 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 MRPL39Q9NYK5 338 aaKnown RBP7.55□□□□□ -1.2
CDKL5-201ENST00000379989 IPO11Q9UI26 975 aaKnown RBP7.55□□□□□ -1.2
CDKL5-201ENST00000379989 MAN2B2Q9Y2E5 1009 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 VWA7Q9Y334 891 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 CSADQ9Y600 493 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 DLGAP1O14490 977 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 NDST3O95803 873 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 CD4P01730 458 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 NR2C2P49116 596 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 PKNOX1P55347 436 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 BST2Q10589 180 aaKnown RBP7.55□□□□□ -1.2
CDKL5-201ENST00000379989 BNIP2Q12982 314 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 MAPRE2Q15555 327 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 STXBP2Q15833 593 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 AGAP6Q5VW22 663 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 PDPK2PQ6A1A2 396 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 CORO6Q6QEF8 472 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 MAVSQ7Z434 540 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 LYSMD2Q8IV50 215 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 NUDCD3Q8IVD9 361 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 CARNMT1Q8N4J0 409 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 SLAIN1Q8ND83 568 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 OR2T34Q8NGX1 318 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 INTS12Q96CB8 462 aaKnown RBP7.55□□□□□ -1.2
CDKL5-201ENST00000379989 AGAP4Q96P64 663 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 ASB2Q96Q27 587 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 CDRT15Q96T59 188 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 SERPINI1Q99574 410 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 RUSC1Q9BVN2 902 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 ACSS3Q9H6R3 686 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 MCCC2Q9HCC0 563 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 AGPAT3Q9NRZ7 376 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-201ENST00000379989 ZNF214Q9UL59 606 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-201ENST00000379989 PCDHGA7Q9Y5G6 932 aa7.55□□□□□ -1.2
CDKL5-201ENST00000379989 LEUTXA8MZ59 168 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 PI4K2BG5E9Z4 385 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 SOCS2O14508 198 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 TOR1AO14656 332 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 BCAS1O75363 584 aaPredicted RBP7.54□□□□□ -1.2
CDKL5-201ENST00000379989 DAB1O75553 588 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 BCAS2O75934 225 aaPredicted RBP7.54□□□□□ -1.2
CDKL5-201ENST00000379989 GSNP06396 782 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 NR3C2P08235 984 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 CKMT2P17540 419 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 GLRA2P23416 452 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 DNAJB2P25686 324 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 FMO4P31512 558 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 UQCRC1P31930 480 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms