RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 WWOXQ9NZC7 414 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 A0A0B4J269 797 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 FOXO6A8MYZ6 492 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 LRP5O75197 1615 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 RTN2O75298 545 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 SPAG7O75391 227 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 PAK4O96013 591 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 ALPPP05187 535 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 CEBPBP17676 345 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 DDX5P17844 614 aaKnown RBP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 HOXD13P35453 343 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 CCT8P50990 548 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 GEMP55040 296 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 TNK2Q07912 1038 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 PPP3CAQ08209 521 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 PDCD2Q16342 344 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 NFIL3Q16649 462 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 HYIQ5T013 277 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 LHX8Q68G74 356 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 RALGPS2Q86X27 583 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 RNF168Q8IYW5 571 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 KLHL32Q96NJ5 620 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 RAB3IPQ96QF0 476 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 POMKQ9H5K3 350 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 SIX2Q9NPC8 291 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 TRMT6Q9UJA5 497 aaKnown RBP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 ITGB4P16144 1822 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 DOT1LQ8TEK3 1739 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 A0A088AWK7 358 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 MTMR11A4FU01 709 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 PSMD3O43242 534 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 OR56A5P0C7T3 313 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 LAMP2P13473 410 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 ZNF10P21506 573 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 MMP13P45452 471 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 CSNK1EP49674 416 aaKnown RBP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 ECT2LQ008S8 904 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 PIGHQ14442 188 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 ELOCQ15369 112 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 SF1Q15637 639 aaKnown RBP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 RBBP7Q16576 425 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 P3H1Q32P28 736 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 C3orf38Q5JPI3 329 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 TMEM126BQ8IUX1 230 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 PDCD7Q8N8D1 485 aaKnown RBP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 TMEM161BQ8NDZ6 487 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 OR5B17Q8NGF7 314 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 LRRC8CQ8TDW0 803 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 EZH1Q92800 747 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 FUBP3Q96I24 572 aaKnown RBP eCLIP6.61□□□□□ -1.359e-9■■■□□ 15.5
NEDD9-202ENST00000379446 DHX33Q9H6R0 707 aaKnown RBP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 HPS4Q9NQG7 708 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 CHCHD3Q9NX63 227 aaKnown RBP6.61□□□□□ -1.35
NEDD9-202ENST00000379446 HCSTQ9UBK5 93 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 MKL2Q9ULH7 1088 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 CHMP2BQ9UQN3 213 aa6.61□□□□□ -1.35
NEDD9-202ENST00000379446 MYH14Q7Z406 1995 aaKnown RBP6.6□□□□□ -1.35
NEDD9-202ENST00000379446 IGKV6D-41A0A0C4DH26 115 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 A0A1B0GVG6 124 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 TCRBV7S2A1N4TA0A589 114 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 C9IYK1 514 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 BCAT2O15382 392 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-202ENST00000379446 VPS26AO75436 327 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 ENO2P09104 434 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-202ENST00000379446 SRFP11831 508 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 TYRP1P17643 537 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 CCND1P24385 295 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 ITGA3P26006 1051 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 COILP38432 576 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-202ENST00000379446 ABL2P42684 1182 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 CCR4P51679 360 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 STX1BP61266 288 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 ASPHQ12797 758 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 CARTPTQ16568 116 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 NAPEPLDQ6IQ20 393 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 MRNIPQ6NTE8 343 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 C1orf186Q6ZWK4 172 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 ARHGAP22Q7Z5H3 698 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 CROCCP2Q86T23 111 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 BBOF1Q8ND07 529 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 ELMO1Q92556 727 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 WNT8BQ93098 351 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 TOE1Q96GM8 510 aaKnown RBP6.6□□□□□ -1.35
NEDD9-202ENST00000379446 GSDMCQ9BYG8 508 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 POLR1EQ9GZS1 481 aaKnown RBP6.6□□□□□ -1.35
NEDD9-202ENST00000379446 MCCC2Q9HCC0 563 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 HCN3Q9P1Z3 774 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 HAO1Q9UJM8 370 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 STRCP1A6NGW2 1772 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 FRMPD4Q14CM0 1322 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 A0A0A6YYK5 440 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-202ENST00000379446 TMEM120BA0PK00 339 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 C2orf71A6NGG8 1288 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 DDX3YO15523 660 aaKnown RBP6.6□□□□□ -1.35
NEDD9-202ENST00000379446 BUD23O43709 281 aaKnown RBP6.6□□□□□ -1.35
NEDD9-202ENST00000379446 KRT16P08779 473 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 CYP11B1P15538 503 aa6.6□□□□□ -1.35
NEDD9-202ENST00000379446 GTF2E2P29084 291 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms