RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 NUMBLQ9Y6R0 609 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 SCN5AQ14524 2016 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 TRIM64A6NGJ6 449 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 TRIM64BA6NI03 449 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 A8MX80 341 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 RTCAO00442 366 aaKnown RBP10.92□□□□□ -0.66
NEDD9-201ENST00000379433 CSF2RAP15509 400 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 PRKCHP24723 683 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 PLK1P53350 603 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 MLLT6P55198 1093 aaPredicted RBP10.92□□□□□ -0.66
NEDD9-201ENST00000379433 DEFB103AP81534 67 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 USP10Q14694 798 aaKnown RBP10.92□□□□□ -0.66
NEDD9-201ENST00000379433 POLD3Q15054 466 aaPredicted RBP10.92□□□□□ -0.66
NEDD9-201ENST00000379433 CES4AQ5XG92 561 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 CWF19L1Q69YN2 538 aaKnown RBP10.92□□□□□ -0.66
NEDD9-201ENST00000379433 NPAS4Q8IUM7 802 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 GRAMD2AQ8IUY3 354 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 HDAC11Q96DB2 347 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 ERLEC1Q96DZ1 483 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 VPS50Q96JG6 964 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 DHRS4Q9BTZ2 278 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 TMEM120AQ9BXJ8 343 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 MAN1C1Q9NR34 630 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 PLLPQ9Y342 182 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 PDCD11Q14690 1871 aaKnown RBP10.92□□□□□ -0.66
NEDD9-201ENST00000379433 RALGAPA2Q2PPJ7 1873 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 FAM159BA6NKW6 160 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 H0YC42 278 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 ITM2AO43736 263 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 ACSL4O60488 711 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 STAMBPO95630 424 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 ATF6P18850 670 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 S100A5P33763 92 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 AQP5P55064 265 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 KDSRQ06136 332 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 CBX3Q13185 183 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 CUL3Q13618 768 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 SUZ12Q15022 739 aaKnown RBP10.92□□□□□ -0.66
NEDD9-201ENST00000379433 MARC1Q5VT66 337 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 ZNF470Q6ECI4 717 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 RPS27LQ71UM5 84 aaKnown RBP10.92□□□□□ -0.66
NEDD9-201ENST00000379433 RTL10Q7L3V2 364 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 DGLUCYQ7Z3D6 616 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 C10orf107Q8IVU9 208 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 TMEM169Q96HH4 297 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 TBL1YQ9BQ87 522 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 OXCT2Q9BYC2 517 aaPredicted RBP10.92□□□□□ -0.66
NEDD9-201ENST00000379433 SNX15Q9NRS6 342 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 RIMKLBQ9ULI2 386 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 CRYL1Q9Y2S2 319 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 C2orf78A6NCI8 922 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 NEMP1O14524 444 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 RAMP2O60895 175 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 KCNJ13O60928 360 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 BTF3P20290 206 aaKnown RBP10.91□□□□□ -0.66
NEDD9-201ENST00000379433 WNT3AP56704 352 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 SCAPQ12770 1279 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 CDH17Q12864 832 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 ITIH4Q14624 930 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 FBXO48Q5FWF7 155 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 ARMC4Q5T2S8 1044 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 NAPEPLDQ6IQ20 393 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 SLC41A1Q8IVJ1 513 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 IRGQQ8WZA9 623 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 CCDC134Q9H6E4 229 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 TASP1Q9H6P5 420 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 GLOD4Q9HC38 313 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 RRN3Q9NYV6 651 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 MOCS1Q9NZB8 636 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 UXTQ9UBK9 157 aaPredicted RBP10.91□□□□□ -0.66
NEDD9-201ENST00000379433 MTF2Q9Y483 593 aaPredicted RBP10.91□□□□□ -0.66
NEDD9-201ENST00000379433 KNL1Q8NG31 2342 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 A0A096LPK6 155 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 TM9SF1O15321 606 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 NCAM2O15394 837 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 C1QAP02745 245 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 NFKBIAP25963 317 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 SEMG2Q02383 582 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 THOC5Q13769 683 aaKnown RBP10.91□□□□□ -0.66
NEDD9-201ENST00000379433 FAM26DQ5JW98 314 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 KIAA1614Q5VZ46 1190 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 CCNYL1Q8N7R7 359 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 NSMCE1Q8WV22 266 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 CCT7Q99832 543 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 EBF4Q9BQW3 602 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 ZYG11BQ9C0D3 744 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 CYP4F12Q9HCS2 524 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 IGSF9Q9P2J2 1179 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 GOLGA8QA0A0J9YX86 632 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 GOLGA8OA6NCC3 632 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 GOLGA8NF8WBI6 632 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 TK2O00142 265 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 CHUKO15111 745 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 SEC24AO95486 1093 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 KRT16P08779 473 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 DDX5P17844 614 aaKnown RBP10.91□□□□□ -0.66
NEDD9-201ENST00000379433 MAGEA3P43357 314 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 MXRA7P84157 204 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 ZNF235Q14590 738 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 GRM3Q14832 879 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms