RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 REPS2Q8NFH8 660 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 SPPL2BQ8TCT7 592 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 ACDQ96AP0 544 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 VMP1Q96GC9 406 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 HSFY1Q96LI6 401 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 MYRFLQ96LU7 910 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 FCRL3Q96P31 734 aaPredicted RBP8.29□□□□□ -1.08
PTPRR-203ENST00000378778 TWNKQ96RR1 684 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 KIFC1Q9BW19 673 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 ACAD9Q9H845 621 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 IGSF5Q9NSI5 407 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 TBC1D13Q9NVG8 400 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 GPATCH2LQ9NWQ4 482 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 FZD10Q9ULW2 581 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 RLFQ13129 1914 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 MGAMO43451 1857 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 RALGAPA2Q2PPJ7 1873 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 PRORSD1PA6NEY8 169 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 KCNU1A8MYU2 1149 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 SOCS2O14508 198 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 VPS4BO75351 444 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 SUPT7LO94864 414 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 HPRP00739 348 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 KRT19P08727 400 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 SBK3P0C264 359 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 PSMB4P28070 264 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 RAP1GAPP47736 663 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 SLC26A2P50443 739 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 BMXP51813 675 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 HNRNPFP52597 415 aaKnown RBP8.28□□□□□ -1.08
PTPRR-203ENST00000378778 PMS2P3Q13401 168 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 PRPSAP1Q14558 356 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 INAQ16352 499 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 TRIM16LQ309B1 348 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 TBCELQ5QJ74 424 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 AGAP7PQ5VUJ5 663 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 NAPEPLDQ6IQ20 393 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 NANOGP8Q6NSW7 305 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 GALNT7Q86SF2 657 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 SLC15A3Q8IY34 581 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 ZNF567Q8N184 647 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 SHCBP1Q8NEM2 672 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 OTUD5Q96G74 571 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 HPDLQ96IR7 371 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 SCYL1Q96KG9 808 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 C12orf42Q96LP6 360 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 PPP1R10Q96QC0 940 aaKnown RBP8.28□□□□□ -1.08
PTPRR-203ENST00000378778 GMLQ99445 158 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 SEZ6LQ9BYH1 1024 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 SEMA6AQ9H2E6 1030 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 POLR1BQ9H9Y6 1135 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 LIN28AQ9H9Z2 209 aaKnown RBP8.28□□□□□ -1.08
PTPRR-203ENST00000378778 ZNF358Q9NW07 568 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.28□□□□□ -1.08
PTPRR-203ENST00000378778 SPATA7Q9P0W8 599 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 CDC14AQ9UNH5 594 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 RUVBL2Q9Y230 463 aaKnown RBP8.28□□□□□ -1.08
PTPRR-203ENST00000378778 TRIM17Q9Y577 477 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 DOCK1Q14185 1865 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 COL11A1P12107 1806 aaPredicted RBP8.28□□□□□ -1.08
PTPRR-203ENST00000378778 CLDN25C9JDP6 229 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 DLGAP1O14490 977 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 DLX3O60479 287 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 KATNA1O75449 491 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 MATN4O95460 622 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 NPPAP01160 153 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 RBP1P09455 135 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 GSTM2P28161 218 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 STAT5BP51692 787 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 NDST1P52848 882 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 RAB10P61026 200 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 POU4F1Q01851 419 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 TNK2Q07912 1038 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 DGKDQ16760 1214 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 KIAA0408Q6ZU52 694 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 KCTD8Q6ZWB6 473 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 PTRH1Q86Y79 214 aaKnown RBP8.28□□□□□ -1.08
PTPRR-203ENST00000378778 CBR4Q8N4T8 237 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 TTLL6Q8N841 843 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 PIK3C3Q8NEB9 887 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 UBA3Q8TBC4 463 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 TRIM54Q9BYV2 358 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 GBA3Q9H227 469 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 RAD21L1Q9H4I0 556 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 AS3MTQ9HBK9 375 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 GIT1Q9Y2X7 761 aa8.28□□□□□ -1.08
PTPRR-203ENST00000378778 RNF103-CHMP3A0A140T963 221 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 STX16-NPEPL1H3BU86 382 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 DYNC1LI2O43237 492 aaPredicted RBP8.27□□□□□ -1.09
PTPRR-203ENST00000378778 ADAM23O75077 832 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 ITGB3P05106 788 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 UGT2B4P06133 528 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 SLC35E2BP0CK96 405 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 STMN1P16949 149 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 CYP2B6P20813 491 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 CYP3A5P20815 502 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 TKTP29401 623 aaKnown RBP8.27□□□□□ -1.09
PTPRR-203ENST00000378778 LRPAP1P30533 357 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 CDH8P55286 799 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 ADARB1P78563 741 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms