RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 CASZ1Q86V15 1759 aa8.8□□□□□ -1
LIG3-202ENST00000378526 BHLHE40O14503 412 aa8.8□□□□□ -1
LIG3-202ENST00000378526 SLC2A4P14672 509 aa8.8□□□□□ -1
LIG3-202ENST00000378526 CTBP2P56545 445 aa8.8□□□□□ -1
LIG3-202ENST00000378526 PTENP60484 403 aa8.8□□□□□ -1
LIG3-202ENST00000378526 ZNF844Q08AG5 666 aa8.8□□□□□ -1
LIG3-202ENST00000378526 SCGB2A2Q13296 93 aa8.8□□□□□ -1
LIG3-202ENST00000378526 SPANXN3Q5MJ09 141 aa8.8□□□□□ -1
LIG3-202ENST00000378526 SSX9Q7RTT3 188 aa8.8□□□□□ -1
LIG3-202ENST00000378526 SETD6Q8TBK2 473 aa8.8□□□□□ -1
LIG3-202ENST00000378526 HOPXQ9BPY8 73 aaPredicted RBP8.8□□□□□ -1
LIG3-202ENST00000378526 SPON2Q9BUD6 331 aa8.8□□□□□ -1
LIG3-202ENST00000378526 CHST12Q9NRB3 414 aa8.8□□□□□ -1
LIG3-202ENST00000378526 POGZQ7Z3K3 1410 aa8.8□□□□□ -1
LIG3-202ENST00000378526 PNMA6EA0A0J9YXQ4 647 aa8.8□□□□□ -1
LIG3-202ENST00000378526 FAM86C2PA6NEL3 165 aa8.8□□□□□ -1
LIG3-202ENST00000378526 OR1I1O60431 355 aa8.8□□□□□ -1
LIG3-202ENST00000378526 PCSK2P16519 638 aa8.8□□□□□ -1
LIG3-202ENST00000378526 RPL9P32969 192 aaKnown RBP8.8□□□□□ -1
LIG3-202ENST00000378526 S100A3P33764 101 aa8.8□□□□□ -1
LIG3-202ENST00000378526 MRPS10P82664 201 aaKnown RBP8.8□□□□□ -1
LIG3-202ENST00000378526 ZIK1Q3SY52 487 aaPredicted RBP8.8□□□□□ -1
LIG3-202ENST00000378526 SH3D19Q5HYK7 790 aa8.8□□□□□ -1
LIG3-202ENST00000378526 TC2NQ8N9U0 490 aa8.8□□□□□ -1
LIG3-202ENST00000378526 RBAKQ9NYW8 714 aaPredicted RBP8.8□□□□□ -1
LIG3-202ENST00000378526 PCDHB2Q9Y5E7 798 aa8.8□□□□□ -1
LIG3-202ENST00000378526 LAMC1P11047 1609 aa8.8□□□□□ -1
LIG3-202ENST00000378526 GTF2F2P13984 249 aa8.8□□□□□ -1
LIG3-202ENST00000378526 UCHL3P15374 230 aa8.8□□□□□ -1
LIG3-202ENST00000378526 KCNA5P22460 613 aa8.8□□□□□ -1
LIG3-202ENST00000378526 NAGLUP54802 743 aa8.8□□□□□ -1
LIG3-202ENST00000378526 OSTNP61366 133 aa8.8□□□□□ -1
LIG3-202ENST00000378526 CACNB2Q08289 660 aaPredicted RBP8.8□□□□□ -1
LIG3-202ENST00000378526 SLC13A2Q13183 592 aa8.8□□□□□ -1
LIG3-202ENST00000378526 NKIRAS2Q9NYR9 191 aa8.8□□□□□ -1
LIG3-202ENST00000378526 CRLS1Q9UJA2 301 aa8.8□□□□□ -1
LIG3-202ENST00000378526 DMRT2Q9Y5R5 561 aa8.8□□□□□ -1
LIG3-202ENST00000378526 ADGBQ8N7X0 1667 aa8.8□□□□□ -1
LIG3-202ENST00000378526 CACNA1FO60840 1977 aa8.8□□□□□ -1
LIG3-202ENST00000378526 FBP2O00757 339 aa8.8□□□□□ -1
LIG3-202ENST00000378526 TBX1O43435 398 aa8.8□□□□□ -1
LIG3-202ENST00000378526 PLA2G6O60733 806 aa8.8□□□□□ -1
LIG3-202ENST00000378526 GEMP55040 296 aa8.8□□□□□ -1
LIG3-202ENST00000378526 PRKCEQ02156 737 aa8.8□□□□□ -1
LIG3-202ENST00000378526 SNX20Q7Z614 316 aa8.8□□□□□ -1
LIG3-202ENST00000378526 ATCAYQ86WG3 371 aa8.8□□□□□ -1
LIG3-202ENST00000378526 LRRC47Q8N1G4 583 aaKnown RBP8.8□□□□□ -1
LIG3-202ENST00000378526 PHC3Q8NDX5 983 aa8.8□□□□□ -1
LIG3-202ENST00000378526 IPMKQ8NFU5 416 aa8.8□□□□□ -1
LIG3-202ENST00000378526 KCNS3Q9BQ31 491 aa8.8□□□□□ -1
LIG3-202ENST00000378526 TRPV4Q9HBA0 871 aa8.8□□□□□ -1
LIG3-202ENST00000378526 SMPD3Q9NY59 655 aaPredicted RBP8.8□□□□□ -1
LIG3-202ENST00000378526 CSADQ9Y600 493 aa8.8□□□□□ -1
LIG3-202ENST00000378526 A0A0G2JMP0 313 aa8.79□□□□□ -1
LIG3-202ENST00000378526 EFCAB7A8K855 629 aa8.79□□□□□ -1
LIG3-202ENST00000378526 IFNA1P01562 189 aa8.79□□□□□ -1
LIG3-202ENST00000378526 PPIBP23284 216 aaKnown RBP8.79□□□□□ -1
LIG3-202ENST00000378526 AVPR1AP37288 418 aa8.79□□□□□ -1
LIG3-202ENST00000378526 LUMP51884 338 aaPredicted RBP8.79□□□□□ -1
LIG3-202ENST00000378526 KCNJ2P63252 427 aa8.79□□□□□ -1
LIG3-202ENST00000378526 PTPN20Q4JDL3 420 aa8.79□□□□□ -1
LIG3-202ENST00000378526 SLFN13Q68D06 897 aa8.79□□□□□ -1
LIG3-202ENST00000378526 KATNAL2Q8IYT4 538 aa8.79□□□□□ -1
LIG3-202ENST00000378526 SLC34A3Q8N130 599 aa8.79□□□□□ -1
LIG3-202ENST00000378526 MFSD2AQ8NA29 543 aa8.79□□□□□ -1
LIG3-202ENST00000378526 C3orf58Q8NDZ4 430 aa8.79□□□□□ -1
LIG3-202ENST00000378526 OR4M2Q8NGB6 313 aa8.79□□□□□ -1
LIG3-202ENST00000378526 ADAM33Q9BZ11 813 aa8.79□□□□□ -1
LIG3-202ENST00000378526 S100A14Q9HCY8 104 aa8.79□□□□□ -1
LIG3-202ENST00000378526 SAGE1Q9NXZ1 904 aa8.79□□□□□ -1
LIG3-202ENST00000378526 ZNF214Q9UL59 606 aaPredicted RBP8.79□□□□□ -1
LIG3-202ENST00000378526 C12orf71A8MTZ7 269 aa8.79□□□□□ -1
LIG3-202ENST00000378526 TFRCP02786 760 aaKnown RBP8.79□□□□□ -1
LIG3-202ENST00000378526 PPP5CP53041 499 aa8.79□□□□□ -1
LIG3-202ENST00000378526 ZNF181Q2M3W8 571 aa8.79□□□□□ -1
LIG3-202ENST00000378526 TMEM44Q2T9K0 475 aa8.79□□□□□ -1
LIG3-202ENST00000378526 SATL1Q86VE3 508 aa8.79□□□□□ -1
LIG3-202ENST00000378526 NT5DC4Q86YG4 428 aa8.79□□□□□ -1
LIG3-202ENST00000378526 SDR16C5Q8N3Y7 309 aa8.79□□□□□ -1
LIG3-202ENST00000378526 ALLCQ8N6M5 410 aa8.79□□□□□ -1
LIG3-202ENST00000378526 PCSK9Q8NBP7 692 aaKnown RBP8.79□□□□□ -1
LIG3-202ENST00000378526 ZNF607Q96SK3 696 aa8.79□□□□□ -1
LIG3-202ENST00000378526 RAD9AQ99638 391 aa8.79□□□□□ -1
LIG3-202ENST00000378526 ZSWIM1Q9BR11 485 aa8.79□□□□□ -1
LIG3-202ENST00000378526 AP5M1Q9H0R1 490 aa8.79□□□□□ -1
LIG3-202ENST00000378526 RUVBL1Q9Y265 456 aaKnown RBP8.79□□□□□ -1
LIG3-202ENST00000378526 ABCB11O95342 1321 aa8.79□□□□□ -1
LIG3-202ENST00000378526 SGTAO43765 313 aa8.79□□□□□ -1
LIG3-202ENST00000378526 ENTPD5O75356 428 aa8.79□□□□□ -1
LIG3-202ENST00000378526 CYP3A4P08684 503 aa8.79□□□□□ -1
LIG3-202ENST00000378526 CYP2C9P11712 490 aa8.79□□□□□ -1
LIG3-202ENST00000378526 MUTP22033 750 aa8.79□□□□□ -1
LIG3-202ENST00000378526 MMP14P50281 582 aa8.79□□□□□ -1
LIG3-202ENST00000378526 RPL14P50914 215 aaKnown RBP8.79□□□□□ -1
LIG3-202ENST00000378526 PAMR1Q6UXH9 720 aa8.79□□□□□ -1
LIG3-202ENST00000378526 SLC7A14Q8TBB6 771 aa8.79□□□□□ -1
LIG3-202ENST00000378526 BPIFB1Q8TDL5 484 aa8.79□□□□□ -1
LIG3-202ENST00000378526 HIPK3Q9H422 1215 aa8.79□□□□□ -1
LIG3-202ENST00000378526 MROH8Q9H579 483 aa8.79□□□□□ -1
LIG3-202ENST00000378526 CLEC11AQ9Y240 323 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms