RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 CCSAPQ6IQ19 270 aaPredicted RBP14.2□□□□□ -0.14
TRIM13-202ENST00000378182 KCTD8Q6ZWB6 473 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 MAGEE2Q8TD90 523 aaPredicted RBP14.2□□□□□ -0.14
TRIM13-202ENST00000378182 VPS35Q96QK1 796 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 LRCH1Q9Y2L9 728 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 STARD13Q9Y3M8 1113 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 PNMA8CA0A1B0GUJ8 204 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 H3BNH8 94 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 PEX11AO75192 247 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 OR5F1O95221 314 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 PGDP52209 483 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 MANFP55145 182 aaKnown RBP14.2□□□□□ -0.14
TRIM13-202ENST00000378182 PEX6Q13608 980 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 ITGA7Q13683 1181 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 ULK3Q6PHR2 472 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 ZNF276Q8N554 614 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 VANGL1Q8TAA9 524 aaPredicted RBP14.2□□□□□ -0.14
TRIM13-202ENST00000378182 SUN3Q8TAQ9 357 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 TMEM237Q96Q45 408 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 PTGFRNQ9P2B2 879 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 DAPK2Q9UIK4 370 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 FAM92AA1XBS5 289 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 ACKR2O00590 384 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 FDPSP14324 419 aaKnown RBP14.2□□□□□ -0.14
TRIM13-202ENST00000378182 KCNA5P22460 613 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 SHMT1P34896 483 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 SCNN1AP37088 669 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 DNPEPQ9ULA0 475 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 RIC1Q4ADV7 1423 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 IQCF5A8MTL0 148 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 FCHO1O14526 889 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 SLC31A1O15431 190 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 DBIP07108 87 aaKnown RBP14.2□□□□□ -0.14
TRIM13-202ENST00000378182 LINC00032P0C843 101 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 TNFSF9P41273 254 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 PSMD4P55036 377 aaKnown RBP14.2□□□□□ -0.14
TRIM13-202ENST00000378182 ZNF155Q12901 538 aaPredicted RBP14.2□□□□□ -0.14
TRIM13-202ENST00000378182 KCNA10Q16322 511 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 XKR4Q5GH76 650 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 KYQ8NBH2 561 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 HJURPQ8NCD3 748 aaPredicted RBP14.2□□□□□ -0.14
TRIM13-202ENST00000378182 OR10H5Q8NGA6 315 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 ZCCHC10Q8TBK6 192 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 SEMA3CQ99985 751 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 CHMP1AQ9HD42 196 aaPredicted RBP14.2□□□□□ -0.14
TRIM13-202ENST00000378182 BMP7P18075 431 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 KCNJ5P48544 419 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 PTPN5P54829 565 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 PKNOX1P55347 436 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 MC1RQ01726 317 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 PRKG2Q13237 762 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 FBXO42Q6P3S6 717 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 P4HA3Q7Z4N8 544 aa14.2□□□□□ -0.14
TRIM13-202ENST00000378182 AARSD1Q9BTE6 412 aaKnown RBP14.2□□□□□ -0.14
TRIM13-202ENST00000378182 A0A1W2PQH9 124 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 MAGEC1O60732 1142 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 PLGP00747 810 aaPredicted RBP14.19□□□□□ -0.14
TRIM13-202ENST00000378182 OR4Q2P0C623 313 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 CEBPGP53567 150 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 FAM91A1Q658Y4 838 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 LZTR1Q8N653 840 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 CDH3P22223 829 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 RPL38P63173 70 aaKnown RBP14.19□□□□□ -0.14
TRIM13-202ENST00000378182 NRF1Q16656 503 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 CHST9Q7L1S5 443 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 OR2L5Q8NG80 312 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 ARMCX1Q9P291 453 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 F8VP50 259 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 SLITRK3O94933 977 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 ZSCAN5DPP0CG00 497 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 FCGR1AP12314 374 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 RARRES1P49788 294 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 SP2Q02086 613 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 MBTD1Q05BQ5 628 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 FAM187BQ17R55 369 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 OTOP1Q7RTM1 612 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 ULK2Q8IYT8 1036 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 DAGLBQ8NCG7 672 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 PNPT1Q8TCS8 783 aaKnown RBP14.19□□□□□ -0.14
TRIM13-202ENST00000378182 TEKT5Q96M29 485 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 CD248Q9HCU0 757 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 ABI3Q9P2A4 366 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 PCDHB11Q9Y5F2 797 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 ADGRA3Q8IWK6 1321 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 PUS10Q3MIT2 529 aaKnown RBP14.19□□□□□ -0.14
TRIM13-202ENST00000378182 ZIK1Q3SY52 487 aaPredicted RBP14.19□□□□□ -0.14
TRIM13-202ENST00000378182 JAZF1Q86VZ6 243 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 ZNF557Q8N988 423 aaPredicted RBP14.19□□□□□ -0.14
TRIM13-202ENST00000378182 STARD8Q92502 1023 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 FNDC11Q9BVV2 318 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 SLC40A1Q9NP59 571 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 PHF11Q9UIL8 331 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 UBA1P22314 1058 aaKnown RBP14.19□□□□□ -0.14
TRIM13-202ENST00000378182 BRCC3P46736 316 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 CCZ1BP86790 482 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 CCZ1P86791 482 aaPredicted RBP14.19□□□□□ -0.14
TRIM13-202ENST00000378182 STX12Q86Y82 276 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 NELL1Q92832 810 aa14.19□□□□□ -0.14
TRIM13-202ENST00000378182 CPED1A4D0V7 1026 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 MC4RP32245 332 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms