RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 DHFR2Q86XF0 187 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 LILRB2Q8N423 598 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 REXO5Q96IC2 774 aaKnown RBP11.87□□□□□ -0.51
NPHP4-202ENST00000378161 POP1Q99575 1024 aaKnown RBP11.87□□□□□ -0.51
NPHP4-202ENST00000378161 C1QTNF1Q9BXJ1 281 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 UCK2Q9BZX2 261 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 NARFLQ9H6Q4 476 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 DPP3Q9NY33 737 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 E2F8A0AVK6 867 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 CAPN14A8MX76 684 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 H3BMM5 538 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 PRPSAP2O60256 369 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 IFNA7P01567 189 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 HNF4AP41235 474 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 STARP49675 285 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 ZNF772Q68DY9 489 aaPredicted RBP11.87□□□□□ -0.51
NPHP4-202ENST00000378161 LRRC55Q6ZSA7 311 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 NOXA1Q86UR1 476 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 LRRC57Q8N9N7 239 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 SLC30A5Q8TAD4 765 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 OTULINQ96BN8 352 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 SECISBP2Q96T21 854 aaKnown RBP11.87□□□□□ -0.51
NPHP4-202ENST00000378161 ZNF416Q9BWM5 594 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 YTHDF1Q9BYJ9 559 aaKnown RBP11.87□□□□□ -0.51
NPHP4-202ENST00000378161 CHORDC1Q9UHD1 332 aaPredicted RBP11.87□□□□□ -0.51
NPHP4-202ENST00000378161 NOSIPQ9Y314 301 aaKnown RBP11.87□□□□□ -0.51
NPHP4-202ENST00000378161 ASTN2O75129 1339 aaPredicted RBP11.87□□□□□ -0.51
NPHP4-202ENST00000378161 LOC110117498-PIK3R3F6TDL0 507 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 TRIM38O00635 465 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 TNNI3P19429 210 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 SSTR3P32745 418 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-202ENST00000378161 TPMTP51580 245 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 SNRPFP62306 86 aaKnown RBP11.86□□□□□ -0.51
NPHP4-202ENST00000378161 COLEC12Q5KU26 742 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 CFAP77Q6ZQR2 320 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 C8orf59Q8N0T1 100 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-202ENST00000378161 GPD1LQ8N335 351 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 FIBCD1Q8N539 461 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 ZCCHC9Q8N567 271 aaKnown RBP11.86□□□□□ -0.51
NPHP4-202ENST00000378161 DEDD2Q8WXF8 326 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 ADPGKQ9BRR6 497 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 ABCG4Q9H172 646 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 LIN7BQ9HAP6 207 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 AP4E1Q9UPM8 1137 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 GINS2Q9Y248 185 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 JRKO75564 520 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 GZMAP12544 262 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 PRG2P13727 222 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 PPP5CP53041 499 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 ZMYND11Q15326 602 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 ZNF181Q2M3W8 571 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 RAP1GAP2Q684P5 730 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 FOXR2Q6PJQ5 311 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 SCML4Q8N228 414 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 MAGEE2Q8TD90 523 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-202ENST00000378161 ST8SIA2Q92186 375 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 SSU72Q9NP77 194 aaKnown RBP11.86□□□□□ -0.51
NPHP4-202ENST00000378161 SF3B1O75533 1304 aaKnown RBP eCLIP11.86□□□□□ -0.51
NPHP4-202ENST00000378161 DCCP43146 1447 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 WRBO00258 174 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 EML1O00423 815 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 DGKQP52824 942 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 PPATQ06203 517 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 GALNT3Q14435 633 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 PLCL1Q15111 1095 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 HHIPL2Q6UWX4 724 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 PLPP6Q8IY26 295 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 LINC00116Q8NCU8 138 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 RBM14Q96PK6 669 aaKnown RBP11.86□□□□□ -0.51
NPHP4-202ENST00000378161 NUSAP1Q9BXS6 441 aaKnown RBP11.86□□□□□ -0.51
NPHP4-202ENST00000378161 KLHL31Q9H511 634 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 POLMQ9NP87 494 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-202ENST00000378161 FIS1Q9Y3D6 152 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 SMIM22K7EJ46 135 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 PTGIRP43119 386 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 SNRNP35Q16560 246 aaKnown RBP11.86□□□□□ -0.51
NPHP4-202ENST00000378161 LRIT3Q3SXY7 679 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 OTUD3Q5T2D3 398 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-202ENST00000378161 AADACL2Q6P093 401 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 ZNF704Q6ZNC4 412 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-202ENST00000378161 EEPD1Q7L9B9 569 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 TXNRD3Q86VQ6 643 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.86□□□□□ -0.51
NPHP4-202ENST00000378161 FAF2Q96CS3 445 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 MARK4Q96L34 752 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 PWWP2AQ96N64 755 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 RUSC1Q9BVN2 902 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 BCS1LQ9Y276 419 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 NID2Q14112 1375 aa11.86□□□□□ -0.51
NPHP4-202ENST00000378161 PIK3C2AO00443 1686 aa11.85□□□□□ -0.51
NPHP4-202ENST00000378161 SPATA31A1Q5TZJ5 1347 aa11.85□□□□□ -0.51
NPHP4-202ENST00000378161 MSH4O15457 936 aa11.85□□□□□ -0.51
NPHP4-202ENST00000378161 SCO1O75880 301 aa11.85□□□□□ -0.51
NPHP4-202ENST00000378161 PMS2P3Q13401 168 aa11.85□□□□□ -0.51
NPHP4-202ENST00000378161 PDZK1Q5T2W1 519 aa11.85□□□□□ -0.51
NPHP4-202ENST00000378161 PLET1Q6UQ28 207 aa11.85□□□□□ -0.51
NPHP4-202ENST00000378161 C19orf18Q8NEA5 215 aa11.85□□□□□ -0.51
NPHP4-202ENST00000378161 LRTOMTQ8WZ04 291 aa11.85□□□□□ -0.51
NPHP4-202ENST00000378161 SGTBQ96EQ0 304 aa11.85□□□□□ -0.51
NPHP4-202ENST00000378161 MASTLQ96GX5 879 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms