RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 NDFIP2Q9NV92 336 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 FGF10O15520 208 aaPredicted RBP25.53■■□□□ 1.68
C9orf40-201ENST00000376854 CPB1P15086 417 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 EIF4EBP2Q13542 120 aaPredicted RBP25.53■■□□□ 1.68
C9orf40-201ENST00000376854 CSHL1Q14406 222 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 UPP1Q16831 310 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 KIAA0930Q6ICG6 404 aaPredicted RBP25.53■■□□□ 1.68
C9orf40-201ENST00000376854 ZNF280DQ6N043 979 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 FAM171BQ6P995 826 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 TMLHEQ9NVH6 421 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 RAB26Q9ULW5 256 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 FIS1Q9Y3D6 152 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 M0QZ92 97 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 AURKAO14965 403 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 CTSHP09668 335 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 ODC1P11926 461 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 HOXC8P31273 242 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 MRPS6P82932 125 aaKnown RBP25.53■■□□□ 1.68
C9orf40-201ENST00000376854 PAN2Q504Q3 1202 aaKnown RBP25.53■■□□□ 1.68
C9orf40-201ENST00000376854 BRMS1LQ5PSV4 323 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 NEPROQ6NW34 567 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 SATL1Q86VE3 508 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 LILRA2Q8N149 483 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 SCML4Q8N228 414 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 ADCY4Q8NFM4 1077 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 MRGPRX2Q96LB1 330 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 PPP1R2P1Q96PQ5 205 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 ACBD6Q9BR61 282 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 TRIM62Q9BVG3 475 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 IGSF5Q9NSI5 407 aa25.53■■□□□ 1.68
C9orf40-201ENST00000376854 ACOT8O14734 319 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 HSPA1AP0DMV8 641 aaKnown RBP25.52■■□□□ 1.68
C9orf40-201ENST00000376854 HSPA1BP0DMV9 641 aaKnown RBP25.52■■□□□ 1.68
C9orf40-201ENST00000376854 TCN1P20061 433 aaPredicted RBP25.52■■□□□ 1.68
C9orf40-201ENST00000376854 HOXC13P31276 330 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 RPL9P32969 192 aaKnown RBP25.52■■□□□ 1.68
C9orf40-201ENST00000376854 RAB27AP51159 221 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 TAF2Q6P1X5 1199 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 RANBP10Q6VN20 620 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 GK5Q6ZS86 529 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 FCRL2Q96LA5 508 aaPredicted RBP25.52■■□□□ 1.68
C9orf40-201ENST00000376854 PKP2Q99959 881 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 MRPL1Q9BYD6 325 aaKnown RBP25.52■■□□□ 1.68
C9orf40-201ENST00000376854 SLC4A7Q9Y6M7 1214 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 CRTAMO95727 393 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 SULT2A1Q06520 285 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 PTK2BQ14289 1009 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 RBM20Q5T481 1227 aaKnown RBP25.52■■□□□ 1.68
C9orf40-201ENST00000376854 MANEALQ5VSG8 457 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 TICAM1Q8IUC6 712 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 PELI3Q8N2H9 469 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 KLHL32Q96NJ5 620 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 NDNQ99608 321 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 CYP4F12Q9HCS2 524 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 UBAP1Q9NZ09 502 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 SFMBT1Q9UHJ3 866 aa25.52■■□□□ 1.68
C9orf40-201ENST00000376854 PRSS51A0A1B0GVH4 220 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 KCNU1A8MYU2 1149 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 CLGNO14967 610 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 MSI1O43347 362 aaKnown RBP25.51■■□□□ 1.67
C9orf40-201ENST00000376854 SMIM18P0DKX4 95 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 FAM83EQ2M2I3 478 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 TIGD7Q6NT04 549 aaPredicted RBP25.51■■□□□ 1.67
C9orf40-201ENST00000376854 AGMOQ6ZNB7 445 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 SPATA24Q86W54 205 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 METTL23Q86XA0 190 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 RNF135Q8IUD6 432 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 FAM156AQ8NDB6 213 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 PRKD2Q9BZL6 878 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 ADA2Q9NZK5 511 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 AP4B1Q9Y6B7 739 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 PGM3O95394 542 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 ETS2P15036 469 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 CCR1P32246 355 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 IRF5Q13568 498 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 PCSK7Q16549 785 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 NAT14Q8WUY8 206 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.51■■□□□ 1.67
C9orf40-201ENST00000376854 COMMD3-BMI1R4GMX3 469 aa25.51■■□□□ 1.67
C9orf40-201ENST00000376854 SMIM31A0A1B0GVY4 71 aa25.5■■□□□ 1.67
C9orf40-201ENST00000376854 TRIM38O00635 465 aa25.5■■□□□ 1.67
C9orf40-201ENST00000376854 HTR7P34969 479 aa25.5■■□□□ 1.67
C9orf40-201ENST00000376854 GPR162Q16538 588 aa25.5■■□□□ 1.67
C9orf40-201ENST00000376854 TECRLQ5HYJ1 363 aa25.5■■□□□ 1.67
C9orf40-201ENST00000376854 BTBD8Q5XKL5 378 aa25.5■■□□□ 1.67
C9orf40-201ENST00000376854 BEND5Q7L4P6 421 aa25.5■■□□□ 1.67
C9orf40-201ENST00000376854 SPNS2Q8IVW8 549 aa25.5■■□□□ 1.67
C9orf40-201ENST00000376854 SPPL2BQ8TCT7 592 aa25.5■■□□□ 1.67
C9orf40-201ENST00000376854 TMEM209Q96SK2 561 aa25.5■■□□□ 1.67
C9orf40-201ENST00000376854 VCX3AQ9NNX9 186 aa25.5■■□□□ 1.67
C9orf40-201ENST00000376854 UTP6Q9NYH9 597 aaKnown RBP25.5■■□□□ 1.67
C9orf40-201ENST00000376854 GIT1Q9Y2X7 761 aa25.5■■□□□ 1.67
C9orf40-201ENST00000376854 TRPV2Q9Y5S1 764 aa25.5■■□□□ 1.67
C9orf40-201ENST00000376854 B3GAT3O94766 335 aa25.49■■□□□ 1.67
C9orf40-201ENST00000376854 BRCC3P46736 316 aa25.49■■□□□ 1.67
C9orf40-201ENST00000376854 DYNC1I2Q13409 638 aaKnown RBP25.49■■□□□ 1.67
C9orf40-201ENST00000376854 TAF1CQ15572 869 aaPredicted RBP25.49■■□□□ 1.67
C9orf40-201ENST00000376854 ZNF789Q5FWF6 425 aa25.49■■□□□ 1.67
C9orf40-201ENST00000376854 NOMO2Q5JPE7 1267 aa25.49■■□□□ 1.67
C9orf40-201ENST00000376854 KIAA0408Q6ZU52 694 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms