RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 ARNT2Q9HBZ2 717 aa21.42■■□□□ 1.02
HLA-C-201ENST00000376228 SYBUQ9NX95 663 aa21.42■■□□□ 1.02
HLA-C-201ENST00000376228 DLGAP2Q9P1A6 1054 aa21.42■■□□□ 1.02
HLA-C-201ENST00000376228 SCAMP3O14828 347 aaKnown RBP21.41■■□□□ 1.02
HLA-C-201ENST00000376228 FAM155BO75949 473 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 RHOCP08134 193 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 ARSAP15289 507 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 SGSHP51688 502 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 NAB1Q13506 487 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 SKIDA1Q1XH10 827 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 SPANXN3Q5MJ09 141 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 RNF43Q68DV7 783 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 CXorf57Q6NSI4 855 aaKnown RBP21.41■■□□□ 1.02
HLA-C-201ENST00000376228 KDELC1Q6UW63 502 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 RANBP10Q6VN20 620 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 LRRC6Q86X45 466 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 SPATA22Q8NHS9 363 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 FAM3CQ92520 227 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 FAM83CQ9BQN1 747 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 KCNH6Q9H252 994 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 HPS4Q9NQG7 708 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.41■■□□□ 1.02
HLA-C-201ENST00000376228 SAMD15Q9P1V8 674 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 WNT6Q9Y6F9 365 aa21.41■■□□□ 1.02
HLA-C-201ENST00000376228 FAM237BA0A1B0GVD1 139 aa21.4■■□□□ 1.02
HLA-C-201ENST00000376228 TYW5A2RUC4 315 aaKnown RBP21.4■■□□□ 1.02
HLA-C-201ENST00000376228 OTOL1A6NHN0 477 aaPredicted RBP21.4■■□□□ 1.02
HLA-C-201ENST00000376228 H0Y858 1186 aa21.4■■□□□ 1.02
HLA-C-201ENST00000376228 POLBP06746 335 aa21.4■■□□□ 1.02
HLA-C-201ENST00000376228 SLC18A1P54219 525 aa21.4■■□□□ 1.02
HLA-C-201ENST00000376228 TMED2Q15363 201 aa21.4■■□□□ 1.02
HLA-C-201ENST00000376228 PRPF39Q86UA1 669 aaKnown RBP21.4■■□□□ 1.02
HLA-C-201ENST00000376228 SLC26A11Q86WA9 606 aa21.4■■□□□ 1.02
HLA-C-201ENST00000376228 BBS5Q8N3I7 341 aa21.4■■□□□ 1.02
HLA-C-201ENST00000376228 DNAAF3Q8N9W5 541 aa21.4■■□□□ 1.02
HLA-C-201ENST00000376228 DTWD2Q8NBA8 298 aa21.4■■□□□ 1.02
HLA-C-201ENST00000376228 OR52K2Q8NGK3 314 aa21.4■■□□□ 1.02
HLA-C-201ENST00000376228 TMA16Q96EY4 203 aaKnown RBP21.4■■□□□ 1.02
HLA-C-201ENST00000376228 SSU72Q9NP77 194 aaKnown RBP21.4■■□□□ 1.02
HLA-C-201ENST00000376228 NT5MQ9NPB1 228 aa21.4■■□□□ 1.02
HLA-C-201ENST00000376228 TBK1Q9UHD2 729 aa21.4■■□□□ 1.02
HLA-C-201ENST00000376228 SH3BP1Q9Y3L3 701 aa21.4■■□□□ 1.02
HLA-C-201ENST00000376228 F5P12259 2224 aa21.4■■□□□ 1.02
HLA-C-201ENST00000376228 A0A0D9SEW6 157 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 E2F8A0AVK6 867 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 SPECC1L-ADORA2AF8WAN1 911 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 LEFTY2O00292 366 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 MAN2B1O00754 1011 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 USP12O75317 370 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 USP1O94782 785 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 MT-CYBP00156 380 aaPredicted RBP21.39■■□□□ 1.02
HLA-C-201ENST00000376228 OXCT1P55809 520 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 CRYMQ14894 314 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 EFTUD2Q15029 972 aaKnown RBP eCLIP21.39■■□□□ 1.023e-6■■■■■ 38.1
HLA-C-201ENST00000376228 DENND5AQ6IQ26 1287 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 CASC4Q6P4E1 433 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 TXNDC11Q6PKC3 985 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 ZNF354CQ86Y25 554 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 OR7D4Q8NG98 312 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 ARRDC2Q8TBH0 407 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 MZB1Q8WU39 189 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 PTCD2Q8WV60 388 aaKnown RBP21.39■■□□□ 1.02
HLA-C-201ENST00000376228 MRGPRX2Q96LB1 330 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 PRRX2Q99811 253 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 ATP13A1Q9HD20 1204 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 DUS2Q9NX74 493 aaKnown RBP21.39■■□□□ 1.02
HLA-C-201ENST00000376228 SOX13Q9UN79 622 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 ARIH1Q9Y4X5 557 aaPredicted RBP21.39■■□□□ 1.02
HLA-C-201ENST00000376228 IKBKGQ9Y6K9 419 aa21.39■■□□□ 1.02
HLA-C-201ENST00000376228 IQANK1A0A1B0GTG1 560 aa21.39■■□□□ 1.01
HLA-C-201ENST00000376228 TSPAN3O60637 253 aa21.39■■□□□ 1.01
HLA-C-201ENST00000376228 LUC7L3O95232 432 aaKnown RBP21.39■■□□□ 1.01
HLA-C-201ENST00000376228 INHBAP08476 426 aa21.39■■□□□ 1.01
HLA-C-201ENST00000376228 TCF3P15923 654 aa21.39■■□□□ 1.01
HLA-C-201ENST00000376228 CTHP32929 405 aa21.39■■□□□ 1.01
HLA-C-201ENST00000376228 OLIG2Q13516 323 aa21.39■■□□□ 1.01
HLA-C-201ENST00000376228 RUNX3Q13761 415 aa21.39■■□□□ 1.01
HLA-C-201ENST00000376228 ITPRIPL2Q3MIP1 535 aa21.39■■□□□ 1.01
HLA-C-201ENST00000376228 OSCP1Q8WVF1 389 aa21.39■■□□□ 1.01
HLA-C-201ENST00000376228 KIFC1Q9BW19 673 aa21.39■■□□□ 1.01
HLA-C-201ENST00000376228 POLR1EQ9GZS1 481 aaKnown RBP21.39■■□□□ 1.01
HLA-C-201ENST00000376228 UBP1Q9NZI7 540 aa21.39■■□□□ 1.01
HLA-C-201ENST00000376228 CFAP97Q9P2B7 532 aa21.39■■□□□ 1.01
HLA-C-201ENST00000376228 SEPT3Q9UH03 358 aa21.39■■□□□ 1.01
HLA-C-201ENST00000376228 MRPS17Q9Y2R5 130 aaKnown RBP21.39■■□□□ 1.01
HLA-C-201ENST00000376228 FAM169AQ9Y6X4 670 aa21.39■■□□□ 1.01
HLA-C-201ENST00000376228 DMDP11532 3685 aa21.38■■□□□ 1.01
HLA-C-201ENST00000376228 VPS13AQ96RL7 3174 aa21.38■■□□□ 1.01
HLA-C-201ENST00000376228 TBL1XO60907 577 aa21.38■■□□□ 1.01
HLA-C-201ENST00000376228 MMP2P08253 660 aa21.38■■□□□ 1.01
HLA-C-201ENST00000376228 CES1P23141 567 aa21.38■■□□□ 1.01
HLA-C-201ENST00000376228 PTPN5P54829 565 aa21.38■■□□□ 1.01
HLA-C-201ENST00000376228 WNT3AP56704 352 aa21.38■■□□□ 1.01
HLA-C-201ENST00000376228 NIPAL4Q0D2K0 466 aa21.38■■□□□ 1.01
HLA-C-201ENST00000376228 MPPE1Q53F39 396 aa21.38■■□□□ 1.01
HLA-C-201ENST00000376228 IL31Q6EBC2 164 aa21.38■■□□□ 1.01
HLA-C-201ENST00000376228 TRMT10BQ6PF06 316 aaKnown RBP21.38■■□□□ 1.01
HLA-C-201ENST00000376228 MARK2Q7KZI7 788 aaKnown RBP21.38■■□□□ 1.01
HLA-C-201ENST00000376228 PGBD5Q8N414 524 aa21.38■■□□□ 1.01
HLA-C-201ENST00000376228 IPMKQ8NFU5 416 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms