RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 CDH13P55290 713 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 POM121L1PQ3SYA9 428 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 SH3D19Q5HYK7 790 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 FNBP1LQ5T0N5 605 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 APLFQ8IW19 511 aaPredicted RBP13.73□□□□□ -0.21
C9orf47-203ENST00000375851 RDH11Q8TC12 318 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 MTFMTQ96DP5 389 aaKnown RBP13.73□□□□□ -0.21
C9orf47-203ENST00000375851 BBS2Q9BXC9 721 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 AGO3Q9H9G7 860 aaKnown RBP13.73□□□□□ -0.21
C9orf47-203ENST00000375851 TMEM88BA6NKF7 163 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 CLDN11O75508 207 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 FAM155BO75949 473 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 MLYCDO95822 493 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 NDUFV1P49821 464 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 IRX1P78414 480 aaPredicted RBP13.73□□□□□ -0.21
C9orf47-203ENST00000375851 UBE3AQ05086 875 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 PPP1R15BQ5SWA1 713 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 OLFML2BQ68BL8 750 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 TMEM192Q8IY95 271 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 CDYL2Q8N8U2 506 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 FAXDC2Q96IV6 333 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 NALCNQ8IZF0 1738 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 XRN1Q8IZH2 1706 aaKnown RBP13.72□□□□□ -0.21
C9orf47-203ENST00000375851 RGSL1A5PLK6 1076 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 ARL5CA6NH57 179 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 EFCAB14O75071 495 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 PARNO95453 639 aaKnown RBP13.72□□□□□ -0.21
C9orf47-203ENST00000375851 RPN2P04844 631 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 SNRPB2P08579 225 aaKnown RBP13.72□□□□□ -0.21
C9orf47-203ENST00000375851 PTGIRP43119 386 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 CREMQ03060 361 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 DET1Q7L5Y6 550 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 METTL3Q86U44 580 aaKnown RBP13.72□□□□□ -0.21
C9orf47-203ENST00000375851 TMEM132CQ8N3T6 1108 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 PHF21AQ96BD5 680 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 REPS1Q96D71 796 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 QKIQ96PU8 341 aaKnown RBP eCLIP13.72□□□□□ -0.21
C9orf47-203ENST00000375851 SH3GL2Q99962 352 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 CCDC3Q9BQI4 270 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 CHRAC1Q9NRG0 131 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 RPTORQ8N122 1335 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.72□□□□□ -0.21
C9orf47-203ENST00000375851 ULK1O75385 1050 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 PIGRP01833 764 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 CES1P23141 567 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 SP100P23497 879 aaPredicted RBP13.72□□□□□ -0.21
C9orf47-203ENST00000375851 ATP6V0D1P61421 351 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 USP4Q13107 963 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 SCIMPQ6UWF3 145 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 ADAMTSL2Q86TH1 951 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 AGAP11Q8TF27 550 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 IRGQQ8WZA9 623 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 UGT2B28Q9BY64 529 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 SDCBP2Q9H190 292 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 KRT84Q9NSB2 600 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 PLK2Q9NYY3 685 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.72□□□□□ -0.21
C9orf47-203ENST00000375851 FFAR3O14843 346 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 GPR42O15529 346 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 ENTPD5O75356 428 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 HGFP14210 728 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 ASPAP45381 313 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 IL5RAQ01344 420 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 SLC1A5Q15758 541 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 QPCTQ16769 361 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 PREPLQ4J6C6 727 aaPredicted RBP13.72□□□□□ -0.21
C9orf47-203ENST00000375851 MARK2Q7KZI7 788 aaKnown RBP13.72□□□□□ -0.21
C9orf47-203ENST00000375851 CPNE8Q86YQ8 564 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 DDX28Q9NUL7 540 aaKnown RBP13.72□□□□□ -0.21
C9orf47-203ENST00000375851 VPS51Q9UID3 782 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 PLLPQ9Y342 182 aa13.72□□□□□ -0.21
C9orf47-203ENST00000375851 SERPINA6P08185 405 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 L1CAMP32004 1257 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 UBAP2LQ14157 1087 aaKnown RBP13.71□□□□□ -0.21
C9orf47-203ENST00000375851 CYP2A13Q16696 494 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 SERPINA13PQ6UXR4 307 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 OR6K2Q8NGY2 324 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 ITFG1Q8TB96 612 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 PIK3R5Q8WYR1 880 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 FBXL18Q96ME1 805 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 TSEN34Q9BSV6 310 aaKnown RBP13.71□□□□□ -0.21
C9orf47-203ENST00000375851 RABGEF1Q9UJ41 708 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 INVSQ9Y283 1065 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 CXCL14O95715 111 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 SPATA31D3P0C874 917 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 RHOQP17081 205 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 GPD2P43304 727 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 GLUD2P49448 558 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 SPATA31D4Q6ZUB0 917 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 EID3Q8N140 333 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 BHLHE22Q8NFJ8 381 aaPredicted RBP13.71□□□□□ -0.21
C9orf47-203ENST00000375851 PPP1R16AQ96I34 528 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 ZNF184Q99676 751 aaPredicted RBP13.71□□□□□ -0.21
C9orf47-203ENST00000375851 ROGDIQ9GZN7 287 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 PNPOQ9NVS9 261 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 C5orf60A6NFR6 353 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 SNTNA6NMZ2 147 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 YBEYP58557 167 aaPredicted RBP13.71□□□□□ -0.21
C9orf47-203ENST00000375851 DAOAP59103 153 aa13.71□□□□□ -0.21
C9orf47-203ENST00000375851 ARHGAP1Q07960 439 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms