RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 DGCR6Q14129 220 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 SLC10A6Q3KNW5 377 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 ZNF618Q5T7W0 954 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 CASP10Q92851 521 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 POLR1EQ9GZS1 481 aaKnown RBP16.94■□□□□ 0.3
VARS-215ENST00000375663 ABCC13Q9NSE7 274 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 SPASTQ9UBP0 616 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 ZMYM5Q9UJ78 669 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 FADS3Q9Y5Q0 445 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 LRP6O75581 1613 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 KRT6AP02538 564 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 KRT6BP04259 564 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 KRT6CP48668 564 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 USP46P62068 366 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 RGS21Q2M5E4 152 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 CTXN3Q4LDR2 81 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 GLT6D1Q7Z4J2 308 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 TREML1Q86YW5 311 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 FOPNLQ96NB1 174 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 GLOD4Q9HC38 313 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 ATAD3AQ9NVI7 634 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 LSM7Q9UK45 103 aaKnown RBP16.93■□□□□ 0.3
VARS-215ENST00000375663 A0A0J9YYE9 177 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 FAM159BA6NKW6 160 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 PEX10O60683 326 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 SEC22BO75396 215 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 IPO13O94829 963 aaKnown RBP16.93■□□□□ 0.3
VARS-215ENST00000375663 PCNAP12004 261 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 AOC1P19801 751 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 ADGRE1Q14246 886 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 KRT33BQ14525 404 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 DEPDC1Q5TB30 811 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 FSTL5Q8N475 847 aaPredicted RBP16.93■□□□□ 0.3
VARS-215ENST00000375663 FBXO44Q9H4M3 255 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 GOLGA2P5Q9HBQ8 144 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 ADARB2Q9NS39 739 aaKnown RBP16.93■□□□□ 0.3
VARS-215ENST00000375663 PNMA8BQ9ULN7 279 aaPredicted RBP16.93■□□□□ 0.3
VARS-215ENST00000375663 TPRKBQ9Y3C4 175 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 PTPRJQ12913 1337 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 LINC00854A0A1B0GVQ3 168 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 CPSF4O95639 269 aaKnown RBP16.93■□□□□ 0.3
VARS-215ENST00000375663 CHRNGP07510 517 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 PRKG2Q13237 762 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 CDH18Q13634 790 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 MFSD10Q14728 455 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 SLC9B1Q4ZJI4 515 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 BNIPLQ7Z465 357 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 SETD9Q8NE22 299 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 CRYGNQ8WXF5 182 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 PGLYRP2Q96PD5 576 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 UNC93B1Q9H1C4 597 aa16.93■□□□□ 0.3
VARS-215ENST00000375663 ZNF214Q9UL59 606 aaPredicted RBP16.93■□□□□ 0.3
VARS-215ENST00000375663 SYNDIG1LA6NDD5 238 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 IL2P60568 153 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 TRIM25Q14258 630 aaKnown RBP16.92■□□□□ 0.3
VARS-215ENST00000375663 TMEM198Q66K66 360 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 TMEM192Q8IY95 271 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 RIBC2Q9H4K1 309 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 ZNF142P52746 1687 aaPredicted RBP16.92■□□□□ 0.3
VARS-215ENST00000375663 IQCA1LA6NCM1 817 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 RAD51BO15315 384 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 LINC00032P0C843 101 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 PIRTP0C851 137 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 HSMCR30P0CW71 290 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 MAPK1P28482 360 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 MPP1Q00013 466 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 DLG1Q12959 904 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 ZC3H12BQ5HYM0 836 aaKnown RBP16.92■□□□□ 0.3
VARS-215ENST00000375663 SPESP1Q6UW49 350 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 LBX2Q6XYB7 198 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 FRMD7Q6ZUT3 714 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 DNAJC1Q96KC8 554 aaKnown RBP16.92■□□□□ 0.3
VARS-215ENST00000375663 COLEC11Q9BWP8 271 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 ZNF112Q9UJU3 913 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 FAM20BO75063 409 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 TOP3BO95985 862 aaKnown RBP16.92■□□□□ 0.3
VARS-215ENST00000375663 LINGO3P0C6S8 592 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 CCNA2P20248 432 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 GSSP48637 474 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 UBE3AQ05086 875 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 EPS8Q12929 822 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 NR1D2Q14995 579 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 DPYSL2Q16555 572 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 SPDYE7PQ495Y7 208 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 KBTBD2Q8IY47 623 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 SYT11Q9BT88 431 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 DNAJC5Q9H3Z4 198 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 LMCD1Q9NZU5 365 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 INVSQ9Y283 1065 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 FARP1Q9Y4F1 1045 aaPredicted RBP16.92■□□□□ 0.3
VARS-215ENST00000375663 ADM5C9JUS6 153 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 ATG7O95352 703 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 ITGAXP20702 1163 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 L1CAMP32004 1257 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 MBTD1Q05BQ5 628 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 MAD2L1Q13257 205 aaPredicted RBP16.92■□□□□ 0.3
VARS-215ENST00000375663 TIGD2Q4W5G0 525 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 FAM35AQ86V20 835 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 BPIFB6Q8NFQ5 453 aa16.92■□□□□ 0.3
VARS-215ENST00000375663 OR2T34Q8NGX1 318 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms