RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 OR13J1Q8NGT2 312 aa18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SP7Q8TDD2 431 aaPredicted RBP18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 TRIB3Q96RU7 358 aa18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SPON2Q9BUD6 331 aa18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 TMEM106CQ9BVX2 250 aa18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CHKBQ9Y259 395 aa18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 TSPAN3O60637 253 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 LRG1P02750 347 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 F7P08709 466 aaPredicted RBP18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 DLDP09622 509 aaKnown RBP18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 FGF3P11487 239 aaPredicted RBP18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 PFKLP17858 780 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 HDCP19113 662 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SKIV2L2P42285 1042 aaKnown RBP18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ABCG1P45844 678 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CD151P48509 253 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SLC7A9P82251 487 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 MPP1Q00013 466 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 TXNDC8Q6A555 127 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ZNF470Q6ECI4 717 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 DENND6AQ8IWF6 608 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ARL14EPQ8N8R7 260 aaPredicted RBP18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ACVR1CQ8NER5 493 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 RFWD2Q8NHY2 731 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 MRPS31Q92665 395 aaKnown RBP18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CYP2S1Q96SQ9 504 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CAB39LQ9H9S4 337 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 THAP1Q9NVV9 213 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 COPG2Q9UBF2 871 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 FBXO5Q9UKT4 447 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SLC39A10Q9ULF5 831 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 IRAK3Q9Y616 596 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CPQQ9Y646 472 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 GBF1Q92538 1859 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CCDC195A0A1B0GUA6 201 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 LDB2O43679 373 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 GJB3O75712 270 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 NDST3O95803 873 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 APOA4P06727 396 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SPATA31D3P0C874 917 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 COL6A2P12110 1019 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 GLDCP23378 1020 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 GABRR2P28476 465 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 NSUN2Q08J23 767 aaKnown RBP eCLIP18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ILF2Q12905 390 aaKnown RBP18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 STX3Q13277 289 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 DLG2Q15700 870 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 TAF1BQ53T94 588 aaPredicted RBP18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 RNF219Q5W0B1 726 aaPredicted RBP18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SPATA31D4Q6ZUB0 917 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 GAREM2Q75VX8 874 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 PLD6Q8N2A8 252 aaKnown RBP18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 MICALL1Q8N3F8 863 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 LRRC37BQ96QE4 947 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 MFSD1Q9H3U5 465 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 KCNK13Q9HB14 408 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 MID2Q9UJV3 735 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 LZTS1Q9Y250 596 aa18.15■□□□□ 0.5
HLA-DQB1-201ENST00000374943 TYW5A2RUC4 315 aaKnown RBP18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TBL1XO60907 577 aa18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CXCL14O95715 111 aa18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 C1RP00736 705 aa18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 SERPINE1P05121 402 aa18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 GRK2P25098 689 aa18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 LEPRP48357 1165 aaKnown RBP18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ZXDBP98169 803 aa18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 FPGSQ05932 587 aa18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CTBP1Q13363 440 aa18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 USP10Q14694 798 aaKnown RBP18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CYTH1Q15438 398 aa18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 UBE2Q1Q7Z7E8 422 aa18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 C1QTNF1Q9BXJ1 281 aa18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 MUC3BQ9H195 1237 aa18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 MYLK2Q9H1R3 596 aa18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ZNF510Q9Y2H8 683 aa18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ARIH1Q9Y4X5 557 aaPredicted RBP18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ACTL7AQ9Y615 435 aa18.14■□□□□ 0.49
HLA-DQB1-201ENST00000374943 FAM95CA0A1B0GW59 222 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 INSIG1O15503 277 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ZMPSTE24O75844 475 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 LUC7L3O95232 432 aaKnown RBP18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 C8AP07357 584 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 SLC35E2BP0CK96 405 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CRABP2P29373 138 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CDC25CP30307 473 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 RGRP47804 291 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ARFIP2P53365 341 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 NCALDP61601 193 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 IRX4P78413 519 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ARF5P84085 180 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 IRF9Q00978 393 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 SLC12A1Q13621 1099 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TMC7Q7Z402 723 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CCDC91Q7Z6B0 441 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CRLF3Q8IUI8 442 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CPXM2Q8N436 756 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 OR6Y1Q8NGX8 325 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 RDH11Q8TC12 318 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms