RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 ADAMTS19Q8TE59 1207 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 MCUR1Q96AQ8 359 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 MYRFLQ96LU7 910 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 TEKT5Q96M29 485 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 ZSWIM3Q96MP5 696 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 RILPQ96NA2 401 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 RBBP8Q99708 897 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 APOL2Q9BQE5 337 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 OSBPL2Q9H1P3 480 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 RNPEPL1Q9HAU8 725 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 CD320Q9NPF0 282 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 SNX15Q9NRS6 342 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 DENND4AQ7Z401 1863 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 ATP5BP06576 529 aaKnown RBP15.73■□□□□ 0.11
CCDC40-202ENST00000374876 LAMP2P13473 410 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 SERPINB8P50452 374 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 TAF10Q12962 218 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 FRG1Q14331 258 aaKnown RBP15.73■□□□□ 0.11
CCDC40-202ENST00000374876 HSF5Q4G112 596 aaPredicted RBP15.73■□□□□ 0.11
CCDC40-202ENST00000374876 CERCAMQ5T4B2 595 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 WDR75Q8IWA0 830 aaKnown RBP15.73■□□□□ 0.11
CCDC40-202ENST00000374876 LEMD2Q8NC56 503 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 TRMT2BQ96GJ1 504 aaKnown RBP15.73■□□□□ 0.11
CCDC40-202ENST00000374876 ATXN7L3BQ96GX2 97 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 NUDCD1Q96RS6 583 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 SIKE1Q9BRV8 207 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 IL22Q9GZX6 179 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 SIK2Q9H0K1 926 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 LIMD1Q9UGP4 676 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 DOCK8Q8NF50 2099 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 ZCWPW2A0A1B0GU75 182 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 LOC730098B7Z3J9 87 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 AP3B1O00203 1094 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 GSC2O15499 205 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 DIAPH2O60879 1101 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 PEX11AO75192 247 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 PROCP04070 461 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 FGF3P11487 239 aaPredicted RBP15.72■□□□□ 0.11
CCDC40-202ENST00000374876 YWHAQP27348 245 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 SLC1A6P48664 564 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 PCLAFQ15004 111 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 HSP90AA5PQ58FG0 334 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 NAPEPLDQ6IQ20 393 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 RINLQ6ZS11 566 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 DCLK2Q8N568 766 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 TDRD5Q8NAT2 981 aaKnown RBP15.72■□□□□ 0.11
CCDC40-202ENST00000374876 NSMCE1Q8WV22 266 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 CEP295NLQ96MC4 621 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 AGAP2Q99490 1192 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 DENND2DQ9H6A0 471 aaPredicted RBP15.72■□□□□ 0.11
CCDC40-202ENST00000374876 UBP1Q9NZI7 540 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 CDH7Q9ULB5 785 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 DFFAO00273 331 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 SERPINE1P05121 402 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 GRK2P25098 689 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 PGFP49763 221 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 LIMK2P53671 638 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 ZNF33AQ06730 810 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 CDH17Q12864 832 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 TEDDM1Q5T9Z0 273 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 BTBD8Q5XKL5 378 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 TXNDC8Q6A555 127 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 BEND5Q7L4P6 421 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 CMC1Q7Z7K0 106 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 C10orf107Q8IVU9 208 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 PIWIL2Q8TC59 973 aaKnown RBP15.72■□□□□ 0.11
CCDC40-202ENST00000374876 PPP4R1Q8TF05 950 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 FBXO32Q969P5 355 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 MFSD3Q96ES6 412 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 TTLL2Q9BWV7 592 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 C20orf96Q9NUD7 363 aaPredicted RBP15.72■□□□□ 0.11
CCDC40-202ENST00000374876 TMEM216Q9P0N5 145 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 UXTQ9UBK9 157 aaPredicted RBP15.72■□□□□ 0.11
CCDC40-202ENST00000374876 DNAJC16Q9Y2G8 782 aa15.72■□□□□ 0.11
CCDC40-202ENST00000374876 CAPN14A8MX76 684 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 PSMD3O43242 534 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 LYPLA1O75608 230 aaPredicted RBP15.71■□□□□ 0.11
CCDC40-202ENST00000374876 RTN3O95197 1032 aaPredicted RBP15.71■□□□□ 0.11
CCDC40-202ENST00000374876 IGLV3-25P01717 112 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 ENO1P06733 434 aaKnown RBP15.71■□□□□ 0.11
CCDC40-202ENST00000374876 RPSAP08865 295 aaKnown RBP15.71■□□□□ 0.11
CCDC40-202ENST00000374876 TPH1P17752 444 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 GM2AP17900 193 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 CDC25CP30307 473 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 CCDC153Q494R4 210 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 GPR158Q5T848 1215 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 FSTL4Q6MZW2 842 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 LINC00523Q86TU6 105 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 KCNMB4Q86W47 210 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 ATPAF2Q8N5M1 289 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.71■□□□□ 0.11
CCDC40-202ENST00000374876 TEX9Q8N6V9 391 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 MAB21L3Q8N8X9 362 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 USP33Q8TEY7 942 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 CYP2S1Q96SQ9 504 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 UHRF1Q96T88 793 aaPredicted RBP15.71■□□□□ 0.11
CCDC40-202ENST00000374876 CHRAC1Q9NRG0 131 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 ABCC13Q9NSE7 274 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 ARHGEF38Q9NXL2 777 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 TAS2R1Q9NYW7 299 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms