RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 TRADDQ15628 312 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 ACCSLQ4AC99 568 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 RNASEH2BQ5TBB1 312 aaKnown RBP17.73■□□□□ 0.43
PFDN6-201ENST00000374606 TXNDC11Q6PKC3 985 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 HOOK3Q86VS8 718 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 PCDH20Q8N6Y1 951 aaKnown RBP17.73■□□□□ 0.43
PFDN6-201ENST00000374606 CPT1BQ92523 772 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 IMP4Q96G21 291 aaKnown RBP17.73■□□□□ 0.43
PFDN6-201ENST00000374606 MRGPRX3Q96LB0 322 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 GDAP1L1Q96MZ0 367 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 SEMA3CQ99985 751 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 TM6SF2Q9BZW4 377 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 SCUBE2Q9NQ36 999 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 EIF2B3Q9NR50 452 aaKnown RBP17.73■□□□□ 0.43
PFDN6-201ENST00000374606 ANAPC5Q9UJX4 755 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 PLA2G4CQ9UP65 541 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 AAR2Q9Y312 384 aaKnown RBP17.73■□□□□ 0.43
PFDN6-201ENST00000374606 FARP1Q9Y4F1 1045 aaPredicted RBP17.73■□□□□ 0.43
PFDN6-201ENST00000374606 MYO18AQ92614 2054 aaKnown RBP17.73■□□□□ 0.43
PFDN6-201ENST00000374606 SMAPO00193 183 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 ATP9BO43861 1147 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 TPSB2P20231 275 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 CD86P42081 329 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 MAGEA6P43360 314 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 RGRP47804 291 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 PLTPP55058 493 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 VSNL1P62760 191 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 MORF4L2Q15014 288 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 PON2Q15165 354 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 E2F5Q15329 346 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 TPSAB1Q15661 275 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 DLG2Q15700 870 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 PTPRNQ16849 979 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 FNDC3BQ53EP0 1204 aaKnown RBP17.72■□□□□ 0.43
PFDN6-201ENST00000374606 SYCP2LQ5T4T6 812 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 ATXN7L2Q5T6C5 722 aaPredicted RBP17.72■□□□□ 0.43
PFDN6-201ENST00000374606 HIBCHQ6NVY1 386 aaPredicted RBP17.72■□□□□ 0.43
PFDN6-201ENST00000374606 WDR93Q6P2C0 686 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 SFTPA1Q8IWL2 248 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 KDM1BQ8NB78 822 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 SPATA22Q8NHS9 363 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 ARRDC2Q8TBH0 407 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 FAM3CQ92520 227 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 PRCCQ92733 491 aaPredicted RBP17.72■□□□□ 0.43
PFDN6-201ENST00000374606 ISG20Q96AZ6 181 aaKnown RBP17.72■□□□□ 0.43
PFDN6-201ENST00000374606 OXNAD1Q96HP4 312 aaPredicted RBP17.72■□□□□ 0.43
PFDN6-201ENST00000374606 NUDCD1Q96RS6 583 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 GORASP1Q9BQQ3 440 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 MLPHQ9BV36 600 aaPredicted RBP17.72■□□□□ 0.43
PFDN6-201ENST00000374606 PARD6BQ9BYG5 372 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 TNKS2Q9H2K2 1166 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 LMAN1LQ9HAT1 526 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 SEMA4GQ9NTN9 838 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 SLCO3A1Q9UIG8 710 aa17.72■□□□□ 0.43
PFDN6-201ENST00000374606 CNOT1A5YKK6 2376 aaKnown RBP17.72■□□□□ 0.43
PFDN6-201ENST00000374606 RALGAPA1Q6GYQ0 2036 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 ERI2A8K979 691 aaKnown RBP17.71■□□□□ 0.43
PFDN6-201ENST00000374606 PSMD3O43242 534 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 TMEM63AO94886 807 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 GSRP00390 522 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 CR2P20023 1033 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 CES1P23141 567 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 TNFRSF4P43489 277 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 RECQLP46063 649 aaPredicted RBP17.71■□□□□ 0.43
PFDN6-201ENST00000374606 CARSP49589 748 aaKnown RBP17.71■□□□□ 0.43
PFDN6-201ENST00000374606 SCNN1BP51168 640 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 AP1S1P61966 158 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 SNRPD1P62314 119 aaKnown RBP17.71■□□□□ 0.43
PFDN6-201ENST00000374606 NSUN2Q08J23 767 aaKnown RBP eCLIP17.71■□□□□ 0.43
PFDN6-201ENST00000374606 NIPAL4Q0D2K0 466 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 MPP3Q13368 585 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 SIM2Q14190 667 aaPredicted RBP17.71■□□□□ 0.43
PFDN6-201ENST00000374606 CSRP2Q16527 193 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 RALGPS1Q5JS13 557 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 ANKRD22Q5VYY1 191 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 ZDHHC24Q6UX98 284 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 PRR23CQ6ZRP0 262 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 RYBPQ8N488 228 aaPredicted RBP17.71■□□□□ 0.43
PFDN6-201ENST00000374606 PDCD7Q8N8D1 485 aaKnown RBP17.71■□□□□ 0.43
PFDN6-201ENST00000374606 NAT8LQ8N9F0 302 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 EIF1ADQ8N9N8 165 aaKnown RBP17.71■□□□□ 0.43
PFDN6-201ENST00000374606 OR2AP1Q8NGE2 309 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 ART4Q93070 314 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 MYO19Q96H55 970 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 RBM15Q96T37 977 aaKnown RBP eCLIP17.71■□□□□ 0.43
PFDN6-201ENST00000374606 LRRC40Q9H9A6 602 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 VPS45Q9NRW7 570 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 UBP1Q9NZI7 540 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 MTRF1LQ9UGC7 380 aaKnown RBP17.71■□□□□ 0.43
PFDN6-201ENST00000374606 FAM153AQ9UHL3 310 aa17.71■□□□□ 0.43
PFDN6-201ENST00000374606 CHD6Q8TD26 2715 aa17.71■□□□□ 0.42
PFDN6-201ENST00000374606 TTC24A2A3L6 582 aaPredicted RBP17.7■□□□□ 0.42
PFDN6-201ENST00000374606 TTC34A8MYJ7 566 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 INSIG1O15503 277 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 BNIP3LO60238 219 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 FOXD2O60548 495 aaPredicted RBP17.7■□□□□ 0.42
PFDN6-201ENST00000374606 PMPCBO75439 489 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 GJB3O75712 270 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 AP2A1O95782 977 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 MT-CYBP00156 380 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms