RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 ITGB7P26010 798 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 CD6P30203 668 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 HSPA9P38646 679 aaKnown RBP18.73■□□□□ 0.59
CDX4-201ENST00000373514 CSNK1DP48730 415 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 ZNF33AQ06730 810 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 NIPAL4Q0D2K0 466 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 WASHC5Q12768 1159 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 XRCC4Q13426 336 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 PIP5KL1Q5T9C9 394 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 FAM46CQ5VWP2 391 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 NCEH1Q6PIU2 408 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 GDPD4Q6W3E5 623 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.73■□□□□ 0.59
CDX4-201ENST00000373514 CEP68Q76N32 757 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 ZSWIM9Q86XI8 627 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 CDKL3Q8IVW4 592 aaPredicted RBP18.73■□□□□ 0.59
CDX4-201ENST00000373514 C1orf54Q8WWF1 131 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 HTR3CQ8WXA8 447 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 NUDCD1Q96RS6 583 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 POLR1EQ9GZS1 481 aaKnown RBP18.73■□□□□ 0.59
CDX4-201ENST00000373514 BRD8Q9H0E9 1235 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 WSB2Q9NYS7 404 aaPredicted RBP18.73■□□□□ 0.59
CDX4-201ENST00000373514 DNPEPQ9ULA0 475 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 SCML1Q9UN30 329 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 ATP8A1Q9Y2Q0 1164 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 MYO15AQ9UKN7 3530 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 VPS13AQ96RL7 3174 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 HACD1B0YJ81 288 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 RHOXF2BP0C7M4 288 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 ADPRHP54922 357 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 AP1S1P61966 158 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 RAD51Q06609 339 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 NSUN2Q08J23 767 aaKnown RBP eCLIP18.72■□□□□ 0.59
CDX4-201ENST00000373514 TRAF2Q12933 501 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 SIM2Q14190 667 aaPredicted RBP18.72■□□□□ 0.59
CDX4-201ENST00000373514 DARS2Q6PI48 645 aaKnown RBP18.72■□□□□ 0.59
CDX4-201ENST00000373514 USP30Q70CQ3 517 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 ARMCX6Q7L4S7 300 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 KLHL7Q8IXQ5 586 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 TMEFF1Q8IYR6 380 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 ARRDC2Q8TBH0 407 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 FAM131CQ96AQ9 280 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 KRT12Q99456 494 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 RHOXF2Q9BQY4 288 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 GPR174Q9BXC1 333 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 CPEB1Q9BZB8 566 aaKnown RBP18.72■□□□□ 0.59
CDX4-201ENST00000373514 EPC1Q9H2F5 836 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 GGT7Q9UJ14 662 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 PCDHGC4Q9Y5F7 938 aa18.72■□□□□ 0.59
CDX4-201ENST00000373514 RALGAPA1Q6GYQ0 2036 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 CNR2P34972 360 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 ABL2P42684 1182 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 GDF10P55107 478 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 TAS2R38P59533 333 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 RPL6Q02878 288 aaKnown RBP18.71■□□□□ 0.59
CDX4-201ENST00000373514 SNX1Q13596 522 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 ZNF805Q5CZA5 627 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 ALG1LQ6GMV1 187 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 ERN2Q76MJ5 926 aaKnown RBP18.71■□□□□ 0.59
CDX4-201ENST00000373514 ZNF567Q8N184 647 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 TTC13Q8NBP0 860 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 SLC35B2Q8TB61 432 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 MAIP1Q8WWC4 291 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 PPP1R16AQ96I34 528 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 LRIG1Q96JA1 1093 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 TUBGCP5Q96RT8 1024 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 OSBPL1AQ9BXW6 950 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 BTBD1Q9H0C5 482 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 DDX47Q9H0S4 455 aaKnown RBP18.71■□□□□ 0.59
CDX4-201ENST00000373514 DUSP15Q9H1R2 295 aaPredicted RBP18.71■□□□□ 0.59
CDX4-201ENST00000373514 C6orf106Q9H6K1 298 aaPredicted RBP18.71■□□□□ 0.59
CDX4-201ENST00000373514 ATP13A3Q9H7F0 1226 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 DYRK4Q9NR20 520 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 FZD4Q9ULV1 537 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 ITM2BQ9Y287 266 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 NCKAP1Q9Y2A7 1128 aa18.71■□□□□ 0.59
CDX4-201ENST00000373514 PRR23AA6NEV1 266 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 FAM47DPA6NHR8 397 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 C16orf96A6NNT2 1141 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 KCNN4O15554 427 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 SPINT1O43278 529 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 LIASO43766 372 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 PRKCGP05129 697 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 MMP2P08253 660 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 ADRB3P13945 408 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 NFKB1P19838 968 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 SERPINA4P29622 427 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 CD68P34810 354 aaPredicted RBP18.7■□□□□ 0.58
CDX4-201ENST00000373514 NBL1P41271 181 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 NEK3P51956 506 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 NHLH1Q02575 133 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 KCTD19Q17RG1 926 aaPredicted RBP18.7■□□□□ 0.58
CDX4-201ENST00000373514 PLK5Q496M5 336 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 PMS2CLQ68D20 193 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 SLC41A1Q8IVJ1 513 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 GPR161Q8N6U8 529 aaKnown RBP18.7■□□□□ 0.58
CDX4-201ENST00000373514 PRELID2Q8N945 189 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 OR14C36Q8NHC7 312 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 LRRC1Q9BTT6 524 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms