RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 RALGPS1Q5JS13 557 aa18.56■□□□□ 0.56
PBX3-205ENST00000373492 GDPD4Q6W3E5 623 aa18.56■□□□□ 0.56
PBX3-205ENST00000373492 AADATQ8N5Z0 425 aa18.56■□□□□ 0.56
PBX3-205ENST00000373492 ACTL9Q8TC94 416 aa18.56■□□□□ 0.56
PBX3-205ENST00000373492 DNASE2BQ8WZ79 361 aa18.56■□□□□ 0.56
PBX3-205ENST00000373492 NUDCD1Q96RS6 583 aa18.56■□□□□ 0.56
PBX3-205ENST00000373492 TUBGCP5Q96RT8 1024 aa18.56■□□□□ 0.56
PBX3-205ENST00000373492 MGME1Q9BQP7 344 aa18.56■□□□□ 0.56
PBX3-205ENST00000373492 HERPUD2Q9BSE4 406 aa18.56■□□□□ 0.56
PBX3-205ENST00000373492 POLR1EQ9GZS1 481 aaKnown RBP18.56■□□□□ 0.56
PBX3-205ENST00000373492 ATP13A3Q9H7F0 1226 aa18.56■□□□□ 0.56
PBX3-205ENST00000373492 SCUBE2Q9NQ36 999 aa18.56■□□□□ 0.56
PBX3-205ENST00000373492 SEPT10Q9P0V9 454 aa18.56■□□□□ 0.56
PBX3-205ENST00000373492 SUSD2Q9UGT4 822 aa18.56■□□□□ 0.56
PBX3-205ENST00000373492 TTLL3Q9Y4R7 772 aa18.56■□□□□ 0.56
PBX3-205ENST00000373492 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.55■□□□□ 0.56
PBX3-205ENST00000373492 MEI4A8MW99 385 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 KCNK1O00180 336 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 ENC1O14682 589 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 INSIG1O15503 277 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 SLC7A4O43246 635 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 GNSP15586 552 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 CES1P23141 567 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 ITGB7P26010 798 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 SERPINA4P29622 427 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 GKP32189 559 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 DRD3P35462 400 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 RGRP47804 291 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 ID4P47928 161 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 METAP1P53582 386 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 LIMK1P53667 647 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 BCL2L1Q07817 233 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 PRKD1Q15139 912 aaPredicted RBP18.55■□□□□ 0.56
PBX3-205ENST00000373492 RSPO4Q2I0M5 234 aaPredicted RBP18.55■□□□□ 0.56
PBX3-205ENST00000373492 ZNF805Q5CZA5 627 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 TRIM61Q5EBN2 209 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 CFAP58Q5T655 872 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 SLC23A3Q6PIS1 610 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.55■□□□□ 0.56
PBX3-205ENST00000373492 RGL4Q8IZJ4 473 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 PGBD5Q8N414 524 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 PAF1Q8N7H5 531 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 TRIM44Q96DX7 344 aaPredicted RBP18.55■□□□□ 0.56
PBX3-205ENST00000373492 ZNF641Q96N77 438 aaPredicted RBP18.55■□□□□ 0.56
PBX3-205ENST00000373492 NUSAP1Q9BXS6 441 aaKnown RBP18.55■□□□□ 0.56
PBX3-205ENST00000373492 NEUROG2Q9H2A3 272 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 SERGEFQ9UGK8 458 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 CDV3Q9UKY7 258 aaKnown RBP18.55■□□□□ 0.56
PBX3-205ENST00000373492 SPTBN4Q9H254 2564 aa18.55■□□□□ 0.56
PBX3-205ENST00000373492 ATXN2Q99700 1313 aaKnown RBP18.54■□□□□ 0.56
PBX3-205ENST00000373492 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.54■□□□□ 0.56
PBX3-205ENST00000373492 PATE3B3GLJ2 98 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 MUSKO15146 869 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 ZNF189O75820 626 aaPredicted RBP18.54■□□□□ 0.56
PBX3-205ENST00000373492 JCHAINP01591 159 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 NEK3P51956 506 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 EIF3EP60228 445 aaKnown RBP18.54■□□□□ 0.56
PBX3-205ENST00000373492 MAXP61244 160 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 IRX4P78413 519 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 CNTN1Q12860 1018 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 KLF1Q13351 362 aaPredicted RBP18.54■□□□□ 0.56
PBX3-205ENST00000373492 SLC45A4Q5BKX6 768 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 TCEAL6Q6IPX3 200 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 FBXL19Q6PCT2 694 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 ERN2Q76MJ5 926 aaKnown RBP18.54■□□□□ 0.56
PBX3-205ENST00000373492 SLC13A5Q86YT5 568 aaPredicted RBP18.54■□□□□ 0.56
PBX3-205ENST00000373492 MAIP1Q8WWC4 291 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 TCEAL3Q969E4 200 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 FAM131CQ96AQ9 280 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 ARRDC3Q96B67 414 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 RMDN1Q96DB5 314 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 KLHL32Q96NJ5 620 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 QKIQ96PU8 341 aaKnown RBP eCLIP18.54■□□□□ 0.563e-6■■■■□ 20.5
PBX3-205ENST00000373492 IL12RB2Q99665 862 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 HDAC8Q9BY41 377 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 SUV39H2Q9H5I1 410 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 C6orf106Q9H6K1 298 aaPredicted RBP18.54■□□□□ 0.56
PBX3-205ENST00000373492 KCND1Q9NSA2 647 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 DLL3Q9NYJ7 618 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 SLC6A14Q9UN76 642 aa18.54■□□□□ 0.56
PBX3-205ENST00000373492 ADAMTS9Q9P2N4 1935 aa18.53■□□□□ 0.56
PBX3-205ENST00000373492 LNP1A1A4G5 178 aa18.53■□□□□ 0.56
PBX3-205ENST00000373492 LRRC72A6NJI9 287 aa18.53■□□□□ 0.56
PBX3-205ENST00000373492 PLK4O00444 970 aa18.53■□□□□ 0.56
PBX3-205ENST00000373492 GDF9O60383 454 aa18.53■□□□□ 0.56
PBX3-205ENST00000373492 PIGNO95427 931 aa18.53■□□□□ 0.56
PBX3-205ENST00000373492 HLA-DQB2P05538 268 aa18.53■□□□□ 0.56
PBX3-205ENST00000373492 SERPINF2P08697 491 aa18.53■□□□□ 0.56
PBX3-205ENST00000373492 RBP3P10745 1247 aa18.53■□□□□ 0.56
PBX3-205ENST00000373492 CR2P20023 1033 aa18.53■□□□□ 0.56
PBX3-205ENST00000373492 GNG11P61952 73 aa18.53■□□□□ 0.56
PBX3-205ENST00000373492 PUM1Q14671 1186 aaKnown RBP eCLIP18.53■□□□□ 0.56
PBX3-205ENST00000373492 DARS2Q6PI48 645 aaKnown RBP18.53■□□□□ 0.56
PBX3-205ENST00000373492 NCEH1Q6PIU2 408 aa18.53■□□□□ 0.56
PBX3-205ENST00000373492 B4GALNT4Q76KP1 1039 aa18.53■□□□□ 0.56
PBX3-205ENST00000373492 CDKL3Q8IVW4 592 aaPredicted RBP18.53■□□□□ 0.56
PBX3-205ENST00000373492 OR2T34Q8NGX1 318 aa18.53■□□□□ 0.56
PBX3-205ENST00000373492 OR14C36Q8NHC7 312 aa18.53■□□□□ 0.56
PBX3-205ENST00000373492 HCAR2Q8TDS4 363 aa18.53■□□□□ 0.56
PBX3-205ENST00000373492 HTR3CQ8WXA8 447 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms