RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 CHST14Q8NCH0 376 aa19.5■□□□□ 0.71
TRAPPC3-204ENST00000373166 GRIN3AQ8TCU5 1115 aa19.5■□□□□ 0.71
TRAPPC3-204ENST00000373166 SYN2Q92777 582 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC3-204ENST00000373166 ATXN7L3BQ96GX2 97 aa19.5■□□□□ 0.71
TRAPPC3-204ENST00000373166 FEM1CQ96JP0 617 aa19.5■□□□□ 0.71
TRAPPC3-204ENST00000373166 PSMB7Q99436 277 aa19.5■□□□□ 0.71
TRAPPC3-204ENST00000373166 CNPY3Q9BT09 278 aa19.5■□□□□ 0.71
TRAPPC3-204ENST00000373166 GPR27Q9NS67 375 aa19.5■□□□□ 0.71
TRAPPC3-204ENST00000373166 PARVAQ9NVD7 372 aa19.5■□□□□ 0.71
TRAPPC3-204ENST00000373166 PPARGC1AQ9UBK2 798 aaKnown RBP19.5■□□□□ 0.71
TRAPPC3-204ENST00000373166 VPS51Q9UID3 782 aa19.5■□□□□ 0.71
TRAPPC3-204ENST00000373166 SALL4Q9UJQ4 1053 aa19.5■□□□□ 0.71
TRAPPC3-204ENST00000373166 BZW2Q9Y6E2 419 aaKnown RBP19.5■□□□□ 0.71
TRAPPC3-204ENST00000373166 POM121BA6NF01 834 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 CBFA2T2O43439 604 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 SLC28A2O43868 658 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 PAK4O96013 591 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 GZMAP12544 262 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 SKILP12757 684 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 RABIFP47224 123 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 NEK3P51956 506 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 RPL7AP62424 266 aaKnown RBP19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 SKOR1P84550 965 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 NRG1Q02297 640 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 KIAA1161Q6NSJ0 714 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 GUSBP11Q6P575 273 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 CCDC81Q6ZN84 652 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 RBM44Q6ZP01 1051 aaKnown RBP19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 VPS36Q86VN1 386 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 ARL14Q8N4G2 192 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 CCDC185Q8N715 623 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 CPLX3Q8WVH0 158 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 NTAN1Q96AB6 310 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 TRIM11Q96F44 468 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 XPO4Q9C0E2 1151 aaKnown RBP19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 OR12D3Q9UGF7 316 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 CAPN11Q9UMQ6 739 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 ENTPD2Q9Y5L3 495 aa19.49■□□□□ 0.71
TRAPPC3-204ENST00000373166 A0A1W2PNU3 283 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 EME2A4GXA9 379 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 DDX3XO00571 662 aaKnown RBP eCLIP19.48■□□□□ 0.712e-8■■■■■ 37.2
TRAPPC3-204ENST00000373166 ATMINO43313 823 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 AQP9O43315 295 aa19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 SMAD6O43541 496 aaKnown RBP19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 LEFTY1O75610 366 aa19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 TCEA3O75764 348 aa19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 FTLP02792 175 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 NR0B2Q15466 257 aa19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 EFHC2Q5JST6 749 aa19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 KIAA1614Q5VZ46 1190 aa19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 RWDD4Q6NW29 188 aaKnown RBP19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 SCYL2Q6P3W7 929 aa19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 ZNF783Q6ZMS7 281 aa19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 DCAF4L2Q8NA75 395 aa19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 ZNF653Q96CK0 615 aa19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 IL12RB2Q99665 862 aa19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 TNKS2Q9H2K2 1166 aa19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 LUC7L2Q9Y383 392 aaKnown RBP19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.48■□□□□ 0.711e-7■■■□□ 15.2
TRAPPC3-204ENST00000373166 SCINQ9Y6U3 715 aa19.48■□□□□ 0.71
TRAPPC3-204ENST00000373166 MYO18BQ8IUG5 2567 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 PYCARD-AS1I3L0S3 204 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 RNF103O00237 685 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 FPGTO14772 594 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 TPP1O14773 563 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 WISP1O95388 367 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 SERPING1P05155 500 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 MYBL1P10243 752 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 JUNDP17535 347 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 MLLT3P42568 568 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 RPIAP49247 311 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 AIF1P55008 147 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 SGCGQ13326 291 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 MAMLD1Q13495 774 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 FGL2Q14314 439 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 NFKBIBQ15653 356 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 DEFB133Q30KQ1 61 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 PLEKHA7Q6IQ23 1121 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 C22orf39Q6P5X5 142 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 FOXR1Q6PIV2 292 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 LINGO4Q6UY18 593 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 DPY19L3Q6ZPD9 716 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 SLFN11Q7Z7L1 901 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 ZSCAN30Q86W11 494 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 DRC7Q8IY82 874 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 WDR36Q8NI36 951 aaKnown RBP19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 LMX1AQ8TE12 382 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 GLMNQ92990 594 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 TBC1D31Q96DN5 1066 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 PRR11Q96HE9 360 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 CNOT8Q9UFF9 292 aaKnown RBP19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 COL6A6A6NMZ7 2263 aa19.47■□□□□ 0.71
TRAPPC3-204ENST00000373166 DOCK4Q8N1I0 1966 aa19.46■□□□□ 0.71
TRAPPC3-204ENST00000373166 A0A0D9SEW6 157 aa19.46■□□□□ 0.71
TRAPPC3-204ENST00000373166 ILVBLA1L0T0 632 aa19.46■□□□□ 0.71
TRAPPC3-204ENST00000373166 CYSRT1A8MQ03 144 aa19.46■□□□□ 0.71
TRAPPC3-204ENST00000373166 CDRT15L2A8MXV6 281 aa19.46■□□□□ 0.71
TRAPPC3-204ENST00000373166 RAD51BO15315 384 aa19.46■□□□□ 0.71
TRAPPC3-204ENST00000373166 ARHGAP6O43182 974 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms