RNA–Protein interactions for RNA: ENST00000372856.7

PABPC4-201, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC4, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-201ENST00000372856 ZSCAN18Q8TBC5 510 aaPredicted RBP16■□□□□ 0.15
PABPC4-201ENST00000372856 SGF29Q96ES7 293 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 RNF39Q9H2S5 420 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 ZNHIT2Q9UHR6 403 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 ITM2BQ9Y287 266 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 WDR90Q96KV7 1748 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 C11orf97A0A1B0GVM6 126 aaPredicted RBP16■□□□□ 0.15
PABPC4-201ENST00000372856 CNOT3O75175 753 aaKnown RBP16■□□□□ 0.15
PABPC4-201ENST00000372856 H2AFYO75367 372 aaKnown RBP16■□□□□ 0.15
PABPC4-201ENST00000372856 ME2P23368 584 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 CSE1LP55060 971 aaKnown RBP16■□□□□ 0.15
PABPC4-201ENST00000372856 NUP107P57740 925 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 RPL26P61254 145 aaKnown RBP16■□□□□ 0.15
PABPC4-201ENST00000372856 LSMEM2Q8N112 164 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 NT5C3BQ969T7 300 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 KLHL32Q96NJ5 620 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 C1QTNF1Q9BXJ1 281 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 ZNF696Q9H7X3 374 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 UBQLN1Q9UMX0 589 aaKnown RBP16■□□□□ 0.15
PABPC4-201ENST00000372856 SMIM28A0A1B0GU29 152 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 PIRO00625 290 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 JCHAINP01591 159 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 PABPC1P11940 636 aaKnown RBP16■□□□□ 0.15
PABPC4-201ENST00000372856 IGFBP6P24592 240 aaPredicted RBP16■□□□□ 0.15
PABPC4-201ENST00000372856 TKTL1P51854 596 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 MAP3K7CLP57077 242 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 SOX4Q06945 474 aaPredicted RBP16■□□□□ 0.15
PABPC4-201ENST00000372856 PRKAA1Q13131 559 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 APOFQ13790 326 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 VASH1Q7L8A9 365 aaPredicted RBP16■□□□□ 0.15
PABPC4-201ENST00000372856 ZC3HC1Q86WB0 502 aaKnown RBP16■□□□□ 0.15
PABPC4-201ENST00000372856 PGAM4Q8N0Y7 254 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 LZTR1Q8N653 840 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 CELF6Q96J87 481 aaKnown RBP16■□□□□ 0.15
PABPC4-201ENST00000372856 CEP295NLQ96MC4 621 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 DUSP16Q9BY84 665 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 XPR1Q9UBH6 696 aa16■□□□□ 0.15
PABPC4-201ENST00000372856 DLX3O60479 287 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 SLC35E2BP0CK96 405 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 ARSAP15289 507 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 MAMDC4Q6UXC1 1216 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 GPR22Q99680 433 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 MED10Q9BTT4 135 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 COPG1Q9Y678 874 aaKnown RBP15.99■□□□□ 0.15
PABPC4-201ENST00000372856 ASB14A6NK59 587 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 HUS1O60921 280 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 CABYRO75952 493 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 DDHD2O94830 711 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 AHSGP02765 367 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 FYNP06241 537 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 RPL10P27635 214 aaKnown RBP15.99■□□□□ 0.15
PABPC4-201ENST00000372856 GABRB3P28472 473 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 CTBP1Q13363 440 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 PDZD4Q76G19 769 aaPredicted RBP15.99■□□□□ 0.15
PABPC4-201ENST00000372856 OTOP3Q7RTS5 596 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 DENND6AQ8IWF6 608 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 PPTC7Q8NI37 304 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 PDCD6IPQ8WUM4 868 aaKnown RBP15.99■□□□□ 0.15
PABPC4-201ENST00000372856 TNIP3Q96KP6 325 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 EFCAB1Q9HAE3 211 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 ZBTB26Q9HCK0 441 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 ADA2Q9NZK5 511 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 MID2Q9UJV3 735 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 RAB26Q9ULW5 256 aa15.99■□□□□ 0.15
PABPC4-201ENST00000372856 YJEFN3A6XGL0 299 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 NPR3P17342 541 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 UGT1A6P19224 532 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 UGT1A1P22309 533 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 UGT1A4P22310 534 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 MZF1P28698 734 aaPredicted RBP15.98■□□□□ 0.15
PABPC4-201ENST00000372856 UGT1A3P35503 534 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 UGT1A5P35504 534 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 BAG6P46379 1132 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 NSUN2Q08J23 767 aaKnown RBP eCLIP15.98■□□□□ 0.15
PABPC4-201ENST00000372856 NRF1Q16656 503 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 ZFP1Q6P2D0 407 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 PAQR9Q6ZVX9 377 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 CENPLQ8N0S6 344 aaPredicted RBP15.98■□□□□ 0.15
PABPC4-201ENST00000372856 PCDH20Q8N6Y1 951 aaKnown RBP15.98■□□□□ 0.15
PABPC4-201ENST00000372856 NXNL1Q96CM4 212 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 MCMBPQ9BTE3 642 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 ULBP1Q9BZM6 244 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 ZNF385DQ9H6B1 395 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 ZFYVE28Q9HCC9 887 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 MRPL42Q9Y6G3 142 aaKnown RBP15.98■□□□□ 0.15
PABPC4-201ENST00000372856 RNASEH2AO75792 299 aaKnown RBP15.98■□□□□ 0.15
PABPC4-201ENST00000372856 TAF6P49848 677 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 MPP1Q00013 466 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 SF3B4Q15427 424 aaKnown RBP eCLIP15.98■□□□□ 0.154e-7■■■■□ 24.1
PABPC4-201ENST00000372856 NOTUMQ6P988 496 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 BORAQ6PGQ7 559 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 ALKAL1Q6UXT8 129 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 GK5Q6ZS86 529 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 TICAM1Q8IUC6 712 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 CPSF7Q8N684 471 aaKnown RBP15.98■□□□□ 0.15
PABPC4-201ENST00000372856 ADCY4Q8NFM4 1077 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 SPATA22Q8NHS9 363 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 IL22Q9GZX6 179 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 SEMA6AQ9H2E6 1030 aa15.98■□□□□ 0.15
PABPC4-201ENST00000372856 EHD1Q9H4M9 534 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms