RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 SERPING1P05155 500 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 NFKBIAP25963 317 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 MIPP30301 263 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 GKP32189 559 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 ARL4AP40617 200 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 ABL2P42684 1182 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 THOP1P52888 689 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 POLR2LP62875 67 aaKnown RBP19.11■□□□□ 0.65
TMEM53-201ENST00000372235 ZBED6P86452 979 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 NSUN2Q08J23 767 aaKnown RBP eCLIP19.11■□□□□ 0.65
TMEM53-201ENST00000372235 DNAJC3Q13217 504 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 SLC25A45Q8N413 288 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 FAM181AQ8N9Y4 354 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 NXPE2Q96DL1 559 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 TBATAQ96M53 351 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.11■□□□□ 0.65
TMEM53-201ENST00000372235 SUV39H2Q9H5I1 410 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 ATP13A3Q9H7F0 1226 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 SP110Q9HB58 689 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 PDFQ9HBH1 243 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 CBX8Q9HC52 389 aa19.11■□□□□ 0.65
TMEM53-201ENST00000372235 TRPM6Q9BX84 2022 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 PTPRBP23467 1997 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 A0A1W2PQ67 120 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 POM121BA6NF01 834 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 TRABD2BA6NFA1 517 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 H3BRJ5 948 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 ATMINO43313 823 aaPredicted RBP19.1■□□□□ 0.65
TMEM53-201ENST00000372235 SIGLEC6O43699 453 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 GP1BAP07359 652 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 NME1P15531 152 aaKnown RBP19.1■□□□□ 0.65
TMEM53-201ENST00000372235 ERCC2P18074 760 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 SERPINA4P29622 427 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 PAPOLAP51003 745 aaKnown RBP19.1■□□□□ 0.65
TMEM53-201ENST00000372235 PFN3P60673 137 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 IL10RBQ08334 325 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 PDE1CQ14123 709 aaPredicted RBP19.1■□□□□ 0.65
TMEM53-201ENST00000372235 FGL2Q14314 439 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 CYTH1Q15438 398 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 TMEM52BQ4KMG9 183 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 PPP6R3Q5H9R7 873 aaPredicted RBP19.1■□□□□ 0.65
TMEM53-201ENST00000372235 SLC22A18ASQ8N1D0 253 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 BBS5Q8N3I7 341 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 ATL2Q8NHH9 583 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 RFFLQ8WZ73 363 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 CENPTQ96BT3 561 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 ZNF599Q96NL3 588 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 KLF6Q99612 283 aaPredicted RBP19.1■□□□□ 0.65
TMEM53-201ENST00000372235 CINPQ9BW66 212 aaPredicted RBP19.1■□□□□ 0.65
TMEM53-201ENST00000372235 MYO1AQ9UBC5 1043 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 LHX3Q9UBR4 397 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 LCMT1Q9UIC8 334 aa19.1■□□□□ 0.65
TMEM53-201ENST00000372235 LUC7L2Q9Y383 392 aaKnown RBP19.1■□□□□ 0.65
TMEM53-201ENST00000372235 TSPAN11A1L157 253 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 CFAP69A5D8W1 941 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 TPP1O14773 563 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 LRCH4O75427 683 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 CKMT1AP12532 417 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 PEX5P50542 639 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 BLKP51451 505 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 CAMK2BQ13554 666 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 FZD2Q14332 565 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 UGP2Q16851 508 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 SKOR2Q2VWA4 1001 aaPredicted RBP19.09■□□□□ 0.65
TMEM53-201ENST00000372235 AFMIDQ63HM1 303 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 GLMNQ92990 594 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 SLC39A8Q9C0K1 460 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 NRSN2Q9GZP1 204 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 KLC2Q9H0B6 622 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 SPASTQ9UBP0 616 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 IP6K2Q9UHH9 426 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 CAPN11Q9UMQ6 739 aa19.09■□□□□ 0.65
TMEM53-201ENST00000372235 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.09■□□□□ 0.65
TMEM53-201ENST00000372235 TRIM38O00635 465 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 RAD51BO15315 384 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 SKILP12757 684 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 TIMP2P16035 220 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 HTR1BP28222 390 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 SERPINB6P35237 376 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 HSPA9P38646 679 aaKnown RBP19.08■□□□□ 0.64
TMEM53-201ENST00000372235 DPYSL2Q16555 572 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 HES3Q5TGS1 186 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 ZCCHC8Q6NZY4 707 aaKnown RBP19.08■□□□□ 0.64
TMEM53-201ENST00000372235 LUZP1Q86V48 1076 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 ARFGAP1Q8N6T3 406 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 PAF1Q8N7H5 531 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 NIPA2Q8N8Q9 360 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 NSMCE1Q8WV22 266 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 TEKT4Q8WW24 435 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 CELF6Q96J87 481 aaKnown RBP19.08■□□□□ 0.64
TMEM53-201ENST00000372235 KCTD15Q96SI1 283 aaPredicted RBP19.08■□□□□ 0.64
TMEM53-201ENST00000372235 SLC13A1Q9BZW2 595 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 GPATCH2LQ9NWQ4 482 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 SEPT3Q9UH03 358 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 SALL4Q9UJQ4 1053 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 CLCA2Q9UQC9 943 aa19.08■□□□□ 0.64
TMEM53-201ENST00000372235 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.07■□□□□ 0.64
TMEM53-201ENST00000372235 J3KR12 359 aa19.07■□□□□ 0.64
TMEM53-201ENST00000372235 DFFAO00273 331 aa19.07■□□□□ 0.64
TMEM53-201ENST00000372235 FFAR2O15552 330 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms