RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 RNF135Q8IUD6 432 aa26.55■■□□□ 1.84
ATPAF1-202ENST00000371937 MZB1Q8WU39 189 aa26.55■■□□□ 1.84
ATPAF1-202ENST00000371937 MTBPQ96DY7 904 aa26.55■■□□□ 1.84
ATPAF1-202ENST00000371937 TRIB3Q96RU7 358 aa26.55■■□□□ 1.84
ATPAF1-202ENST00000371937 C20orf96Q9NUD7 363 aaPredicted RBP26.55■■□□□ 1.84
ATPAF1-202ENST00000371937 TXNDC16Q9P2K2 825 aa26.55■■□□□ 1.84
ATPAF1-202ENST00000371937 PABPC1P11940 636 aaKnown RBP26.54■■□□□ 1.84
ATPAF1-202ENST00000371937 GBP2P32456 591 aaPredicted RBP26.54■■□□□ 1.84
ATPAF1-202ENST00000371937 SULT2A1Q06520 285 aa26.54■■□□□ 1.84
ATPAF1-202ENST00000371937 MSLNQ13421 630 aaPredicted RBP26.54■■□□□ 1.84
ATPAF1-202ENST00000371937 ADAM15Q13444 863 aa26.54■■□□□ 1.84
ATPAF1-202ENST00000371937 DHCR24Q15392 516 aa26.54■■□□□ 1.84
ATPAF1-202ENST00000371937 NCEH1Q6PIU2 408 aa26.54■■□□□ 1.84
ATPAF1-202ENST00000371937 KCNMB4Q86W47 210 aa26.54■■□□□ 1.84
ATPAF1-202ENST00000371937 RSPRY1Q96DX4 576 aa26.54■■□□□ 1.84
ATPAF1-202ENST00000371937 ZNF778Q96MU6 729 aa26.54■■□□□ 1.84
ATPAF1-202ENST00000371937 TDRD1Q9BXT4 1180 aaKnown RBP26.54■■□□□ 1.84
ATPAF1-202ENST00000371937 KCNK9Q9NPC2 374 aa26.54■■□□□ 1.84
ATPAF1-202ENST00000371937 K7ERQ8 282 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 FAM155BO75949 473 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 ADH1CP00326 375 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 MT-ND3P03897 115 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 AP1S1P61966 158 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 FUT11Q495W5 492 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 ATAT1Q5SQI0 421 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 SRLQ86TD4 932 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 RAI2Q9Y5P3 530 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 TMEM120BA0PK00 339 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 UGT1A9O60656 530 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 PAPSS2O95340 614 aaPredicted RBP26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 CREB1P16220 341 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 MAPK8P45983 427 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 CSNK1DP48730 415 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 EML3Q32P44 896 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 ASTLQ6HA08 431 aaPredicted RBP26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 CES5AQ6NT32 575 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 CPNE1Q99829 537 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 ADGRE3Q9BY15 652 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 UGT1A7Q9HAW7 530 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 UGT1A10Q9HAW8 530 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 UGT1A8Q9HAW9 530 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 SSU72Q9NP77 194 aaKnown RBP26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 TREX1Q9NSU2 369 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 SLC25A13Q9UJS0 675 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 CDH7Q9ULB5 785 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 CHKBQ9Y259 395 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 HS3ST2Q9Y278 367 aa26.53■■□□□ 1.84
ATPAF1-202ENST00000371937 MYOFQ9NZM1 2061 aa26.52■■□□□ 1.84
ATPAF1-202ENST00000371937 A0A1W2PPM1 405 aa26.52■■□□□ 1.84
ATPAF1-202ENST00000371937 SHOX2O60902 331 aaPredicted RBP26.52■■□□□ 1.84
ATPAF1-202ENST00000371937 GUCY1A3Q02108 690 aa26.52■■□□□ 1.84
ATPAF1-202ENST00000371937 GALNT3Q14435 633 aa26.52■■□□□ 1.84
ATPAF1-202ENST00000371937 HSP90AA5PQ58FG0 334 aa26.52■■□□□ 1.84
ATPAF1-202ENST00000371937 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.52■■□□□ 1.84
ATPAF1-202ENST00000371937 ALKBH8Q96BT7 664 aaKnown RBP26.52■■□□□ 1.84
ATPAF1-202ENST00000371937 NSMCE3Q96MG7 304 aa26.52■■□□□ 1.84
ATPAF1-202ENST00000371937 THG1LQ9NWX6 298 aaKnown RBP26.52■■□□□ 1.84
ATPAF1-202ENST00000371937 NSMCE4AQ9NXX6 385 aa26.52■■□□□ 1.84
ATPAF1-202ENST00000371937 IL1RAPL1Q9NZN1 696 aa26.52■■□□□ 1.84
ATPAF1-202ENST00000371937 SMG5Q9UPR3 1016 aaKnown RBP26.52■■□□□ 1.84
ATPAF1-202ENST00000371937 SMAD6O43541 496 aaKnown RBP26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 CYP17A1P05093 508 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 ADH5P11766 374 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 CHN1P15882 459 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 KRT4P19013 534 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 TEDDM1Q5T9Z0 273 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 ESRP1Q6NXG1 681 aaKnown RBP26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 PACS1Q6VY07 963 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 MDM1Q8TC05 714 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 E2F7Q96AV8 911 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 ISG20Q96AZ6 181 aaKnown RBP26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 RMDN1Q96DB5 314 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 PCDHGC4Q9Y5F7 938 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 CCDC78A2IDD5 438 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 MROH6A6NGR9 719 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 HEPACAM2A8MVW5 462 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 TRIM49D1C9J1S8 452 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 HOXC11O43248 304 aaPredicted RBP26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 NFATC1O95644 943 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 GP5P40197 560 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 GNGT1P63211 74 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 ATXN7L2Q5T6C5 722 aaPredicted RBP26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 TSTD2Q5T7W7 516 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 KIAA0930Q6ICG6 404 aaPredicted RBP26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 KIAA0907Q7Z7F0 614 aaPredicted RBP26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 AHI1Q8N157 1196 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 BRSK1Q8TDC3 778 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 PEX13Q92968 403 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 CENPTQ96BT3 561 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 CDH22Q9UJ99 828 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 FBXO10Q9UK96 956 aa26.51■■□□□ 1.83
ATPAF1-202ENST00000371937 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP26.5■■□□□ 1.83
ATPAF1-202ENST00000371937 PRPF4O43172 522 aaKnown RBP eCLIP26.5■■□□□ 1.83
ATPAF1-202ENST00000371937 IGSF6O95976 241 aa26.5■■□□□ 1.83
ATPAF1-202ENST00000371937 SLC18A1P54219 525 aa26.5■■□□□ 1.83
ATPAF1-202ENST00000371937 ECT2LQ008S8 904 aa26.5■■□□□ 1.83
ATPAF1-202ENST00000371937 CNGA3Q16281 694 aa26.5■■□□□ 1.83
ATPAF1-202ENST00000371937 GRTP1Q5TC63 336 aa26.5■■□□□ 1.83
ATPAF1-202ENST00000371937 CHRDL2Q6WN34 429 aa26.5■■□□□ 1.83
ATPAF1-202ENST00000371937 C4orf33Q8N1A6 199 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms