RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 OMDQ99983 421 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 MRPL57Q9BQC6 102 aaKnown RBP29.21■■■□□ 2.27
SSBP3-204ENST00000371320 MYLKQ15746 1914 aa29.2■■■□□ 2.27
SSBP3-204ENST00000371320 AURKAO14965 403 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 GRID2O43424 1007 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 ZMPSTE24O75844 475 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 SOAT2O75908 522 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 ARPP19P56211 112 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 DSC2Q02487 901 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 MAP3K21Q5TCX8 1036 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 FAM171A1Q5VUB5 890 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 RAP1GAP2Q684P5 730 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 FBXL22Q6P050 247 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 ACAD11Q709F0 780 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 DEFB107AQ8IZN7 70 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 LSMEM2Q8N112 164 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 CCNYL1Q8N7R7 359 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 IGSF8Q969P0 613 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 NUF2Q9BZD4 464 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 MTPAPQ9NVV4 582 aaKnown RBP eCLIP29.2■■■□□ 2.26
SSBP3-204ENST00000371320 CLIC5Q9NZA1 410 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 SSX2IPQ9Y2D8 614 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 FRMPD3Q5JV73 1810 aa29.2■■■□□ 2.26
SSBP3-204ENST00000371320 FKBP6O75344 327 aa29.19■■■□□ 2.26
SSBP3-204ENST00000371320 EPHA3P29320 983 aa29.19■■■□□ 2.26
SSBP3-204ENST00000371320 LSM12Q3MHD2 195 aaKnown RBP29.19■■■□□ 2.26
SSBP3-204ENST00000371320 TMCO4Q5TGY1 634 aa29.19■■■□□ 2.26
SSBP3-204ENST00000371320 PGM2L1Q6PCE3 622 aa29.19■■■□□ 2.26
SSBP3-204ENST00000371320 LENG8Q96PV6 779 aaPredicted RBP29.19■■■□□ 2.26
SSBP3-204ENST00000371320 RTKNQ9BST9 563 aa29.19■■■□□ 2.26
SSBP3-204ENST00000371320 OLA1Q9NTK5 396 aaKnown RBP29.19■■■□□ 2.26
SSBP3-204ENST00000371320 MARCH2Q9P0N8 246 aa29.19■■■□□ 2.26
SSBP3-204ENST00000371320 CDH22Q9UJ99 828 aa29.19■■■□□ 2.26
SSBP3-204ENST00000371320 FAM92AA1XBS5 289 aa29.19■■■□□ 2.26
SSBP3-204ENST00000371320 ALDH1A1P00352 501 aa29.19■■■□□ 2.26
SSBP3-204ENST00000371320 MMP2P08253 660 aa29.19■■■□□ 2.26
SSBP3-204ENST00000371320 HMBSP08397 361 aa29.19■■■□□ 2.26
SSBP3-204ENST00000371320 BTKQ06187 659 aa29.19■■■□□ 2.26
SSBP3-204ENST00000371320 C10orf120Q5SQS8 335 aa29.19■■■□□ 2.26
SSBP3-204ENST00000371320 RBM20Q5T481 1227 aaKnown RBP29.19■■■□□ 2.26
SSBP3-204ENST00000371320 ANO7Q6IWH7 933 aa29.19■■■□□ 2.26
SSBP3-204ENST00000371320 PDCD6IPQ8WUM4 868 aaKnown RBP29.19■■■□□ 2.26
SSBP3-204ENST00000371320 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.19■■■□□ 2.264e-6■■■□□ 16.4
SSBP3-204ENST00000371320 TLR8Q9NR97 1041 aaKnown RBP29.19■■■□□ 2.26
SSBP3-204ENST00000371320 PLXNA3P51805 1871 aa29.19■■■□□ 2.26
SSBP3-204ENST00000371320 PDE5AO76074 875 aa29.18■■■□□ 2.26
SSBP3-204ENST00000371320 SERPINB5P36952 375 aa29.18■■■□□ 2.26
SSBP3-204ENST00000371320 ZNF280DQ6N043 979 aa29.18■■■□□ 2.26
SSBP3-204ENST00000371320 TEX26Q8N6G2 289 aa29.18■■■□□ 2.26
SSBP3-204ENST00000371320 B3GALT6Q96L58 329 aa29.18■■■□□ 2.26
SSBP3-204ENST00000371320 NDNQ99608 321 aa29.18■■■□□ 2.26
SSBP3-204ENST00000371320 TTC1Q99614 292 aa29.18■■■□□ 2.26
SSBP3-204ENST00000371320 OSBPL1AQ9BXW6 950 aa29.18■■■□□ 2.26
SSBP3-204ENST00000371320 CAMSAP3Q9P1Y5 1249 aaPredicted RBP29.18■■■□□ 2.26
SSBP3-204ENST00000371320 SLC27A5Q9Y2P5 690 aa29.18■■■□□ 2.26
SSBP3-204ENST00000371320 OR6C75A6NL08 312 aa29.17■■■□□ 2.26
SSBP3-204ENST00000371320 RTN3O95197 1032 aaPredicted RBP29.17■■■□□ 2.26
SSBP3-204ENST00000371320 BAG2O95816 211 aa29.17■■■□□ 2.26
SSBP3-204ENST00000371320 TAF10Q12962 218 aa29.17■■■□□ 2.26
SSBP3-204ENST00000371320 ZNF789Q5FWF6 425 aa29.17■■■□□ 2.26
SSBP3-204ENST00000371320 MIEF2Q96C03 454 aa29.17■■■□□ 2.26
SSBP3-204ENST00000371320 SGF29Q96ES7 293 aa29.17■■■□□ 2.26
SSBP3-204ENST00000371320 CNDP1Q96KN2 507 aa29.17■■■□□ 2.26
SSBP3-204ENST00000371320 NDE1Q9NXR1 346 aa29.17■■■□□ 2.26
SSBP3-204ENST00000371320 CDYLQ9Y232 598 aa29.17■■■□□ 2.26
SSBP3-204ENST00000371320 SLC12A8A0AV02 714 aa29.17■■■□□ 2.26
SSBP3-204ENST00000371320 TTC24A2A3L6 582 aaPredicted RBP29.17■■■□□ 2.26
SSBP3-204ENST00000371320 PAPSS2O95340 614 aaPredicted RBP29.17■■■□□ 2.26
SSBP3-204ENST00000371320 THRAP10827 490 aa29.17■■■□□ 2.26
SSBP3-204ENST00000371320 LEPRP48357 1165 aaKnown RBP29.17■■■□□ 2.26
SSBP3-204ENST00000371320 CLCN5P51795 746 aa29.17■■■□□ 2.26
SSBP3-204ENST00000371320 MRPL58Q14197 206 aaKnown RBP29.17■■■□□ 2.26
SSBP3-204ENST00000371320 POLD3Q15054 466 aaPredicted RBP29.17■■■□□ 2.26
SSBP3-204ENST00000371320 FAM83EQ2M2I3 478 aa29.17■■■□□ 2.26
SSBP3-204ENST00000371320 AAGABQ6PD74 315 aa29.17■■■□□ 2.26
SSBP3-204ENST00000371320 RPRD1AQ96P16 312 aaPredicted RBP29.17■■■□□ 2.26
SSBP3-204ENST00000371320 IGSF5Q9NSI5 407 aa29.17■■■□□ 2.26
SSBP3-204ENST00000371320 TMEM161AQ9NX61 479 aa29.17■■■□□ 2.26
SSBP3-204ENST00000371320 NPHS1O60500 1241 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 RAMP2O60895 175 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 PDHA1P08559 390 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 PIK3R1P27986 724 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 TBL3Q12788 808 aaKnown RBP29.16■■■□□ 2.26
SSBP3-204ENST00000371320 MSLNQ13421 630 aaPredicted RBP29.16■■■□□ 2.26
SSBP3-204ENST00000371320 CSHL1Q14406 222 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 IHHQ14623 411 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 ABI1Q8IZP0 508 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 TXNDC5Q8NBS9 432 aaKnown RBP29.16■■■□□ 2.26
SSBP3-204ENST00000371320 OR13J1Q8NGT2 312 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 OLFM1Q99784 485 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 NCKIPSDQ9NZQ3 722 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 PPM1HQ9ULR3 514 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 LRCH1Q9Y2L9 728 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 THSD7BQ9C0I4 1608 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 DRGXA6NNA5 263 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 ATP5F1P24539 256 aaPredicted RBP29.16■■■□□ 2.26
SSBP3-204ENST00000371320 RASIP1Q5U651 963 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 CIR1Q86X95 450 aaPredicted RBP29.16■■■□□ 2.26
SSBP3-204ENST00000371320 STON2Q8WXE9 905 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 GPR62Q9BZJ7 368 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms