RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 PRRC2CQ9Y520 2896 aaKnown RBP7.13□□□□□ -1.27
USP1-202ENST00000371146 CELSR3Q9NYQ7 3312 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 RPP40O75818 363 aaKnown RBP7.13□□□□□ -1.27
USP1-202ENST00000371146 GABBR2O75899 941 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 TUBB4AP04350 444 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 LINC00271P0C7V0 271 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 GRIA2P42262 883 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 MLLT6P55198 1093 aaPredicted RBP7.13□□□□□ -1.27
USP1-202ENST00000371146 DSC2Q02487 901 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 SLC10A7Q0GE19 358 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 DYNC1I2Q13409 638 aaKnown RBP7.13□□□□□ -1.27
USP1-202ENST00000371146 TFDP2Q14188 446 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 ZRANB3Q5FWF4 1079 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 RAET1GQ6H3X3 334 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 RFX8Q6ZV50 586 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 SAMD14Q8IZD0 417 aaPredicted RBP7.13□□□□□ -1.27
USP1-202ENST00000371146 SYCE1Q8N0S2 351 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 C2orf73Q8N5S3 287 aaPredicted RBP7.13□□□□□ -1.27
USP1-202ENST00000371146 SPACA7Q96KW9 195 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 OXCT2Q9BYC2 517 aaPredicted RBP7.13□□□□□ -1.27
USP1-202ENST00000371146 SLC39A8Q9C0K1 460 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 MKRN2Q9H000 416 aaKnown RBP7.13□□□□□ -1.27
USP1-202ENST00000371146 LHX5Q9H2C1 402 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 VCX3BQ9H321 246 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 PRO3102Q9H379 93 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 FAM96AQ9H5X1 160 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 CLIC5Q9NZA1 410 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 TXNDC16Q9P2K2 825 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 ZNHIT2Q9UHR6 403 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 VPS51Q9UID3 782 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 PAIP2BQ9ULR5 123 aaKnown RBP7.13□□□□□ -1.27
USP1-202ENST00000371146 GPSM3Q9Y4H4 160 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 ADGRG1Q9Y653 693 aa7.13□□□□□ -1.27
USP1-202ENST00000371146 TRANK1O15050 2925 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 LCTP09848 1927 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 C2CD4BA6NLJ0 364 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 CLDN11O75508 207 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 SMNDC1O75940 238 aaKnown RBP eCLIP7.12□□□□□ -1.27
USP1-202ENST00000371146 KIAA0754O94854 1291 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 ATP1A1P05023 1023 aaKnown RBP7.12□□□□□ -1.27
USP1-202ENST00000371146 ALOX15P16050 662 aaPredicted RBP7.12□□□□□ -1.27
USP1-202ENST00000371146 ACSL1P33121 698 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 LIG3P49916 1009 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 METAP1P53582 386 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 ZXDAP98168 799 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 CTC1Q2NKJ3 1217 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 TRIM61Q5EBN2 209 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 TMEM150AQ86TG1 271 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 TMC8Q8IU68 726 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 TRIM58Q8NG06 486 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 KCTD15Q96SI1 283 aaPredicted RBP7.12□□□□□ -1.27
USP1-202ENST00000371146 NAP1L3Q99457 506 aaPredicted RBP7.12□□□□□ -1.27
USP1-202ENST00000371146 HPS4Q9NQG7 708 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 ANAPC5Q9UJX4 755 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 REV3LO60673 3130 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 DOCK9Q9BZ29 2069 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 PCNX2A6NKB5 2137 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 TNFRSF10BO14763 440 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 MOSPD3O75425 235 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 DAB1O75553 588 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 SKAP2O75563 359 aaPredicted RBP7.12□□□□□ -1.27
USP1-202ENST00000371146 LEFTY1O75610 366 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 PROSCO94903 275 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 RASGRP1O95267 797 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 RBL1P28749 1068 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 HOXD11P31277 338 aaPredicted RBP7.12□□□□□ -1.27
USP1-202ENST00000371146 CHRNA4P43681 627 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 CLCN2P51788 898 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 LRRC32Q14392 662 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 SF3A2Q15428 464 aaKnown RBP7.12□□□□□ -1.27
USP1-202ENST00000371146 FUT11Q495W5 492 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 THOC7Q6I9Y2 204 aaKnown RBP7.12□□□□□ -1.27
USP1-202ENST00000371146 ZNF761Q86XN6 746 aaPredicted RBP7.12□□□□□ -1.27
USP1-202ENST00000371146 ZBTB8BQ8NAP8 495 aaPredicted RBP7.12□□□□□ -1.27
USP1-202ENST00000371146 NKD2Q969F2 451 aaPredicted RBP7.12□□□□□ -1.27
USP1-202ENST00000371146 LRRC45Q96CN5 670 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 CLIP3Q96DZ5 547 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 RABEP2Q9H5N1 569 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 CD248Q9HCU0 757 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 AIPL1Q9NZN9 384 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 KLF15Q9UIH9 416 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 ACAD8Q9UKU7 415 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 TLR6Q9Y2C9 796 aa7.12□□□□□ -1.27
USP1-202ENST00000371146 C1orf232A0A0U1RR37 186 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 C1QTNF3-AMACRE9PGA6 284 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 IGSF6O95976 241 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 PYGMP11217 842 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 ALDH4A1P30038 563 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 MMP13P45452 471 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 SNRPD1P62314 119 aaKnown RBP7.11□□□□□ -1.27
USP1-202ENST00000371146 ZNF33AQ06730 810 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 DMWDQ09019 674 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 GPS1Q13098 491 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 PRPSAP1Q14558 356 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 PTPRCAPQ14761 206 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 EML3Q32P44 896 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 CCBE1Q6UXH8 406 aaPredicted RBP7.11□□□□□ -1.27
USP1-202ENST00000371146 DSG4Q86SJ6 1040 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 C1orf210Q8IVY1 113 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 TEKT4Q8WW24 435 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms