RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 DNAI2Q9GZS0 605 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 SEMA4AQ9H3S1 761 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 PACSIN2Q9UNF0 486 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-204ENST00000369530 A0A1W2PQF6 199 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 FKBP6O75344 327 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 OR6B1O95007 311 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 FUCA1P04066 466 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 ZCCHC18P0CG32 403 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 FSHRP23945 695 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 TARSP26639 723 aaKnown RBP6.97□□□□□ -1.29
CSDE1-204ENST00000369530 SSTR3P32745 418 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-204ENST00000369530 OSTNP61366 133 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 C19orf57Q0VDD7 668 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 PTPRNQ16849 979 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 WDR45BQ5MNZ6 344 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 RARS2Q5T160 578 aaKnown RBP6.97□□□□□ -1.29
CSDE1-204ENST00000369530 SLX4IPQ5VYV7 408 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 NXNQ6DKJ4 435 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 ALKBH5Q6P6C2 394 aaKnown RBP6.97□□□□□ -1.29
CSDE1-204ENST00000369530 CCDC149Q6ZUS6 474 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 KANSL1Q7Z3B3 1105 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 USP37Q86T82 979 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 TMEM126BQ8IUX1 230 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 LSMEM1Q8N8F7 131 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 LRRC57Q8N9N7 239 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 MAELQ96JY0 434 aaKnown RBP6.97□□□□□ -1.29
CSDE1-204ENST00000369530 FCRL2Q96LA5 508 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-204ENST00000369530 DDX50Q9BQ39 737 aaKnown RBP6.97□□□□□ -1.29
CSDE1-204ENST00000369530 C1QTNF1Q9BXJ1 281 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 TRIM55Q9BYV6 548 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 IMPG2Q9BZV3 1241 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 TMEM245Q9H330 911 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 ENTPD7Q9NQZ7 604 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 GID8Q9NWU2 228 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 SATB2Q9UPW6 733 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 DNAJC16Q9Y2G8 782 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 PCDHA3Q9Y5H8 950 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 A0A087X0T9 212 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 GOLGA8CPA6NN73 597 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 XPO1O14980 1071 aaKnown RBP6.97□□□□□ -1.29
CSDE1-204ENST00000369530 SOAT2O75908 522 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 IL1BP01584 269 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 FAM228BP0C875 321 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 FOSL1P15407 271 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 CYP2F1P24903 491 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 PCSK6P29122 969 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 ATP5DP30049 168 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 IFNAR2P48551 515 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 PLD1Q13393 1074 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 DPYSQ14117 519 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 DRAP1Q14919 205 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-204ENST00000369530 ZNF829Q3KNS6 432 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-204ENST00000369530 MMAAQ8IVH4 418 aaKnown RBP6.97□□□□□ -1.29
CSDE1-204ENST00000369530 ELMOD1Q8N336 334 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 SYNPOQ8N3V7 929 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 OR6Y1Q8NGX8 325 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 UHMK1Q8TAS1 419 aaKnown RBP6.97□□□□□ -1.29
CSDE1-204ENST00000369530 GIPC3Q8TF64 312 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 DEPDC1BQ8WUY9 529 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 BORCS5Q969J3 196 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 ZNF560Q96MR9 790 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 LRRC37BQ96QE4 947 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 FMO2Q99518 471 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 ZBED2Q9BTP6 218 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 GOLPH3Q9H4A6 298 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 RAB20Q9NX57 234 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 NCKIPSDQ9NZQ3 722 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 HAO1Q9UJM8 370 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 TDRKHQ9Y2W6 561 aaKnown RBP6.97□□□□□ -1.29
CSDE1-204ENST00000369530 AK5Q9Y6K8 562 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 ZFC3H1O60293 1989 aaKnown RBP6.97□□□□□ -1.29
CSDE1-204ENST00000369530 HAT1O14929 419 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 AVPR2P30518 371 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 PTK2Q05397 1052 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 TUBA3CQ13748 450 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 NCOA4Q13772 614 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 CLUL1Q15846 466 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 CCDC6Q16204 474 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 TAZQ16635 292 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 TMEM214Q6NUQ4 689 aaKnown RBP6.97□□□□□ -1.29
CSDE1-204ENST00000369530 IZUMO2Q6UXV1 221 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 WDR5BQ86VZ2 330 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 GLYCTKQ8IVS8 523 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 MINDY2Q8NBR6 621 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 LILRB4Q8NHJ6 448 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 GPR152Q8TDT2 470 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 TADA1Q96BN2 335 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 KCNK16Q96T55 309 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 TASP1Q9H6P5 420 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 LTB4R2Q9NPC1 389 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 SSUH2Q9Y2M2 353 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 PCSK5Q92824 1860 aa6.97□□□□□ -1.29
CSDE1-204ENST00000369530 GOLGA8MH3BSY2 632 aa6.96□□□□□ -1.29
CSDE1-204ENST00000369530 CDK2AP1O14519 115 aa6.96□□□□□ -1.29
CSDE1-204ENST00000369530 COCHO43405 550 aa6.96□□□□□ -1.29
CSDE1-204ENST00000369530 TADA2AO75478 443 aa6.96□□□□□ -1.29
CSDE1-204ENST00000369530 ABCB1P08183 1280 aaPredicted RBP6.96□□□□□ -1.29
CSDE1-204ENST00000369530 H2AFZP0C0S5 128 aa6.96□□□□□ -1.29
CSDE1-204ENST00000369530 WEE2P0C1S8 567 aa6.96□□□□□ -1.29
CSDE1-204ENST00000369530 CCNCP24863 283 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms