RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 GREM1O60565 184 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 CLDN11O75508 207 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 STC2O76061 302 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 KLF8O95600 359 aaPredicted RBP8.94□□□□□ -0.98
SNX27-201ENST00000368838 TTC4O95801 387 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 CCNYL3P0C7X3 344 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 HSD17B3P37058 310 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 WASP42768 502 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 DHPSP49366 369 aaPredicted RBP8.94□□□□□ -0.98
SNX27-201ENST00000368838 PMS2P54278 862 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 CDH4P55283 916 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 MRPS25P82663 173 aaKnown RBP8.94□□□□□ -0.98
SNX27-201ENST00000368838 WASHC5Q12768 1159 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 EFEMP1Q12805 493 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 UAP1Q16222 522 aaPredicted RBP8.94□□□□□ -0.98
SNX27-201ENST00000368838 ST3GAL2Q16842 350 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 TEX44Q53QW1 395 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 TNFAIP8L3Q5GJ75 292 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 PLA2G2CQ5R387 149 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 ADGRF1Q5T601 910 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 ALG1LQ6GMV1 187 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 ITPRIPL1Q6GPH6 555 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 FBXL22Q6P050 247 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 NPNTQ6UXI9 565 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 Q6ZNB5 142 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 CENPUQ71F23 418 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 SETD3Q86TU7 594 aaPredicted RBP8.94□□□□□ -0.98
SNX27-201ENST00000368838 CCDC13Q8IYE1 715 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 DEFB119Q8N690 84 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 TEX26Q8N6G2 289 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 ZNF557Q8N988 423 aaPredicted RBP8.94□□□□□ -0.98
SNX27-201ENST00000368838 FAM71DQ8N9W8 422 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 GLIS1Q8NBF1 620 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 TXNDC5Q8NBS9 432 aaKnown RBP8.94□□□□□ -0.98
SNX27-201ENST00000368838 MDGA1Q8NFP4 955 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 P2RY11Q96G91 374 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 LOXL4Q96JB6 756 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 ZC3H10Q96K80 434 aaKnown RBP8.94□□□□□ -0.98
SNX27-201ENST00000368838 TEKT5Q96M29 485 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 NAT9Q9BTE0 207 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 EDEM2Q9BV94 578 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 MAGEB5Q9BZ81 275 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 MAGEH1Q9H213 219 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 EPB41L4BQ9H329 900 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 CCSER2Q9H7U1 834 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 IGSF5Q9NSI5 407 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 TBC1D30Q9Y2I9 924 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 PCDHB3Q9Y5E6 796 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 NUMA1Q14980 2115 aa8.94□□□□□ -0.98
SNX27-201ENST00000368838 ATXN2Q99700 1313 aaKnown RBP8.94□□□□□ -0.98
SNX27-201ENST00000368838 GOLGA6BA6NDN3 693 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 A6NNZ2 444 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 C4orf47A7E2U8 309 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 TM4SF5O14894 197 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 MSI1O43347 362 aaKnown RBP8.93□□□□□ -0.98
SNX27-201ENST00000368838 RIPK2O43353 540 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 MAFKO60675 156 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 FAM155BO75949 473 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 DXOO77932 396 aaKnown RBP8.93□□□□□ -0.98
SNX27-201ENST00000368838 TBX18O95935 607 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 ADH5P11766 374 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 OXCT1P55809 520 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 ARL4CP56559 192 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 SARNPP82979 210 aaKnown RBP8.93□□□□□ -0.98
SNX27-201ENST00000368838 FRG1Q14331 258 aaKnown RBP8.93□□□□□ -0.98
SNX27-201ENST00000368838 RFTN1Q14699 578 aaPredicted RBP8.93□□□□□ -0.98
SNX27-201ENST00000368838 LLGL1Q15334 1064 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 ANO4Q32M45 955 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 TUBB8Q3ZCM7 444 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 FAM133BQ5BKY9 247 aaKnown RBP8.93□□□□□ -0.98
SNX27-201ENST00000368838 RABGAP1LQ5R372 815 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 ANKRD20A2Q5SQ80 823 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 LY6G5CQ5SRR4 150 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 ANKRD20A1Q5TYW2 823 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 ANKRD20A3Q5VUR7 823 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 PSAPL1Q6NUJ1 521 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 ZC3H18Q86VM9 953 aaKnown RBP8.93□□□□□ -0.98
SNX27-201ENST00000368838 TDRPQ86YL5 185 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 BBS7Q8IWZ6 715 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 ADGRG2Q8IZP9 1017 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 PDIK1LQ8N165 341 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 KRT222Q8N1A0 295 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 PGBD3Q8N328 593 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 RIBC1Q8N443 379 aaPredicted RBP8.93□□□□□ -0.98
SNX27-201ENST00000368838 NPWQ8N729 165 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 HMGB4Q8WW32 186 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 PIGKQ92643 395 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 OTUB2Q96DC9 234 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 PGM2Q96G03 612 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 RBM15Q96T37 977 aaKnown RBP eCLIP8.93□□□□□ -0.98
SNX27-201ENST00000368838 FSCN3Q9NQT6 498 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 TMPRSS4Q9NRS4 437 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 VPS45Q9NRW7 570 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 BCCIPQ9P287 314 aaKnown RBP eCLIP8.93□□□□□ -0.98
SNX27-201ENST00000368838 EBF1Q9UH73 591 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 NUDT5Q9UKK9 219 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 RALYQ9UKM9 306 aaKnown RBP8.93□□□□□ -0.98
SNX27-201ENST00000368838 MMP17Q9ULZ9 603 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 IGF2RP11717 2491 aa8.93□□□□□ -0.98
SNX27-201ENST00000368838 DOCK4Q8N1I0 1966 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms