RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 ITGB5P18084 799 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 ADSLP30566 484 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 HOXA7P31268 230 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 CASP3P42574 277 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 ACTR2P61160 394 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 DLG4P78352 724 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 DPYSQ14117 519 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 SQLEQ14534 574 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 RCN1Q15293 331 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 TESK1Q15569 626 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 HADHQ16836 314 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 AASDHQ4L235 1098 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 TMEM177Q53S58 311 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 ZBTB41Q5SVQ8 909 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 TEX35Q5T0J7 233 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 CYP4A22Q5TCH4 519 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 GARNL3Q5VVW2 1013 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 KRT80Q6KB66 452 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 PAPD4Q6PIY7 484 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 LRIG3Q6UXM1 1119 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 FAM83HQ6ZRV2 1179 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 PXKQ7Z7A4 578 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 ATG4DQ86TL0 474 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 SLCO6A1Q86UG4 719 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 PPIL6Q8IXY8 311 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 TMEM145Q8NBT3 493 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 CHST13Q8NET6 341 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 MIPOL1Q8TD10 442 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 SLC26A7Q8TE54 656 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 HASPINQ8TF76 798 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 DCAF4Q8WV16 495 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 NCLNQ969V3 563 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 RILPL2Q969X0 211 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 NEIL1Q96FI4 390 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 PGAP3Q96FM1 320 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 SIPA1Q96FS4 1042 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 TWNKQ96RR1 684 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 NOL10Q9BSC4 688 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 KIFC3Q9BVG8 833 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 PHF20Q9BVI0 1012 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 SPZ1Q9BXG8 430 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 ZDHHC5Q9C0B5 715 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 GLT8D2Q9H1C3 349 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 NDST4Q9H3R1 872 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 ZNF768Q9H5H4 540 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 MMRN2Q9H8L6 949 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 C19orf73Q9NVV2 129 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 NDUFAF4Q9P032 175 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 C5AR2Q9P296 337 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 ANKMY1Q9P2S6 941 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 TLK1Q9UKI8 766 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 NAALADL1Q9UQQ1 740 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 SPENQ96T58 3664 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 SHROOM3Q8TF72 1996 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 NBEAL1Q6ZS30 2694 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 RAD50Q92878 1312 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 FAM86B1E9PN63 330 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 VWA5AO00534 786 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 TO15178 435 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 CD3EAPO15446 510 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 FRAT2O75474 233 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 BCAS2O75934 225 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 IPO13O94829 963 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 GCNT3O95395 438 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 LTA4HP09960 611 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 TPBGLP0DKB5 382 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 FGFR2P21802 821 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 GALP22466 123 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 CTNNB1P35222 781 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 MAGEA4P43358 317 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 ARCN1P48444 511 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 RARSP54136 660 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 CTSWP56202 376 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 MRPS15P82914 257 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 RNASELQ05823 741 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 SCAPQ12770 1279 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 SRSF5Q13243 272 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 MPP3Q13368 585 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 HABP2Q14520 560 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 FUT11Q495W5 492 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 XKR3Q5GH77 459 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 PRAMEF14Q5SWL7 426 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 PLEKHS1Q5SXH7 462 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 SLC35F1Q5T1Q4 408 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 FKBP1CQ5VVH2 108 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 MTFR2Q6P444 385 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 COMTD1Q86VU5 262 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 WDR49Q8IV35 697 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 NKAIN4Q8IVV8 208 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 ZC3H7AQ8IWR0 971 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 EFCAB13Q8IY85 973 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 DIS3L2Q8IYB7 885 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 C17orf53Q8N3J3 647 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 ZNF610Q8N9Z0 462 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 TDRD5Q8NAT2 981 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 LILRB4Q8NHJ6 448 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 AFG1LQ8WV93 481 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 C18orf8Q96DM3 657 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 KTI12Q96EK9 354 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms