RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 NAP1L1P55209 391 aaKnown RBP22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 RACK1P63244 317 aaKnown RBP22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 ADCY2Q08462 1091 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 ZNF235Q14590 738 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 ZNF284Q2VY69 593 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 TMEM259Q4ZIN3 620 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 LRRC73Q5JTD7 316 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 MARC1Q5VT66 337 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 SEL1L3Q68CR1 1132 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 NPNTQ6UXI9 565 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 SPOCD1Q6ZMY3 1216 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 PRPF39Q86UA1 669 aaKnown RBP22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 ZSWIM9Q86XI8 627 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 RFX6Q8HWS3 928 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 CAMK1DQ8IU85 385 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 LRRC8AQ8IWT6 810 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 OR2I1PQ8NGU4 316 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 FATE1Q969F0 183 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 RAB7BQ96AH8 199 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 HDAC11Q96DB2 347 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 MGME1Q9BQP7 344 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 TMEM9BQ9NQ34 198 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 ITM2BQ9Y287 266 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 A0A1B0GVT2 93 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 MACROD2A1Z1Q3 448 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 MATN3O15232 486 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 PCDH8O95206 1070 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 KRT10P13645 584 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 ITIH2P19823 946 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 CTNNA1P35221 906 aaKnown RBP22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 HSPA9P38646 679 aaKnown RBP22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 MMP13P45452 471 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 MAPK8P45983 427 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 ID4P47928 161 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 MAXP61244 160 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 KIF5AQ12840 1032 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 HNRNPDQ14103 355 aaKnown RBP22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 LLGL1Q15334 1064 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 KIAA1524Q8TCG1 905 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 HCAR2Q8TDS4 363 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 KLK6Q92876 244 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 SERAC1Q96JX3 654 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 ZNF641Q96N77 438 aaPredicted RBP22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 NUDCD1Q96RS6 583 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 MAK16Q9BXY0 300 aaKnown RBP22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 PCDHA3Q9Y5H8 950 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 HEY1Q9Y5J3 304 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 CABIN1Q9Y6J0 2220 aa22.67■■□□□ 1.22
ECHDC1-203ENST00000368291 A0A1W2PR77 199 aa22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 GOLGA6L3A6NEY3 463 aa22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 TRAFD1O14545 582 aaPredicted RBP22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 ARHGAP6O43182 974 aa22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 ZRANB2O95218 330 aaKnown RBP eCLIP22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 SYPP08247 313 aa22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 PPIDQ08752 370 aaKnown RBP22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 FGL2Q14314 439 aa22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 TIGD7Q6NT04 549 aaPredicted RBP22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 TTC7BQ86TV6 843 aa22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 NT5DC3Q86UY8 548 aa22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 RCOR2Q8IZ40 523 aa22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 MINDY1Q8N5J2 469 aa22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 EXD1Q8NHP7 514 aa22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 NSMCE1Q8WV22 266 aa22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 ECHDC3Q96DC8 303 aa22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 OLFM3Q96PB7 478 aa22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 LGMNQ99538 433 aa22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 GTPBP2Q9BX10 602 aaKnown RBP22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 ATP13A3Q9H7F0 1226 aa22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 DMTF1Q9Y222 760 aa22.66■■□□□ 1.22
ECHDC1-203ENST00000368291 hCG_1818297A0A087WSY0 165 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 PRLRP16471 622 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 MX2P20592 715 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 SDHBP21912 280 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 CTNNA2P26232 953 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 NUDT1P36639 197 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 PEX5P50542 639 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 AP1S1P61966 158 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 DYNLT1P63172 113 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 CCZ1BP86790 482 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 CCZ1P86791 482 aaPredicted RBP22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 SETMARQ53H47 684 aaPredicted RBP22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 ODF2Q5BJF6 829 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 TFDP3Q5H9I0 405 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 NAPEPLDQ6IQ20 393 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 CCDC112Q8NEF3 446 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 RTKNQ9BST9 563 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 ZDHHC5Q9C0B5 715 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 NOD2Q9HC29 1040 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 NT5MQ9NPB1 228 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 ANKRD6Q9Y2G4 727 aa22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.65■■□□□ 1.22
ECHDC1-203ENST00000368291 VILLO15195 856 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 SLC31A1O15431 190 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 TSPAN6O43657 245 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 ZFXP17010 805 aaPredicted RBP22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 CD38P28907 300 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 SERPINA4P29622 427 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 BCL2L1Q07817 233 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 PUM1Q14671 1186 aaKnown RBP eCLIP22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms