RNA–Protein interactions for RNA: ENST00000368258.7

CCT3-203, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-203ENST00000368258 RHOJQ9H4E5 214 aa12.4□□□□□ -0.42
CCT3-203ENST00000368258 HMG20AQ9NP66 347 aa12.4□□□□□ -0.42
CCT3-203ENST00000368258 CASS4Q9NQ75 786 aa12.4□□□□□ -0.42
CCT3-203ENST00000368258 ZNF302Q9NR11 478 aa12.4□□□□□ -0.42
CCT3-203ENST00000368258 SMPD3Q9NY59 655 aaPredicted RBP12.4□□□□□ -0.42
CCT3-203ENST00000368258 BFARQ9NZS9 450 aa12.4□□□□□ -0.42
CCT3-203ENST00000368258 HMGXB4Q9UGU5 601 aa12.4□□□□□ -0.42
CCT3-203ENST00000368258 ZNF639Q9UID6 485 aa12.4□□□□□ -0.42
CCT3-203ENST00000368258 AP4E1Q9UPM8 1137 aa12.4□□□□□ -0.42
CCT3-203ENST00000368258 COL11A2P13942 1736 aaPredicted RBP12.39□□□□□ -0.43
CCT3-203ENST00000368258 MGAMO43451 1857 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 IGKV6D-21A0A0A0MT36 114 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 E2F8A0AVK6 867 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 TTC24A2A3L6 582 aaPredicted RBP12.39□□□□□ -0.43
CCT3-203ENST00000368258 DLX3O60479 287 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 RSL1D1O76021 490 aaKnown RBP12.39□□□□□ -0.43
CCT3-203ENST00000368258 PFKMP08237 780 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 PSMA4P25789 261 aaKnown RBP12.39□□□□□ -0.43
CCT3-203ENST00000368258 PSMB4P28070 264 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 GRIA3P42263 894 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 CCR10P46092 362 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 CDH8P55286 799 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 ADARB1P78563 741 aaKnown RBP12.39□□□□□ -0.43
CCT3-203ENST00000368258 GALNT1Q10472 559 aaPredicted RBP12.39□□□□□ -0.43
CCT3-203ENST00000368258 ITGADQ13349 1161 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 CYBRD1Q53TN4 286 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 FKBP1CQ5VVH2 108 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 GTF2IRD2BQ6EKJ0 949 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 MPZL3Q6UWV2 235 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 TFAP2DQ7Z6R9 452 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 GTF2IRD2Q86UP8 949 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 SFRP1Q8N474 314 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 LRRN4Q8WUT4 740 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 PTCD2Q8WV60 388 aaKnown RBP12.39□□□□□ -0.43
CCT3-203ENST00000368258 S100ZQ8WXG8 99 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 KCTD15Q96SI1 283 aaPredicted RBP12.39□□□□□ -0.43
CCT3-203ENST00000368258 BCL7BQ9BQE9 202 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 MUC3BQ9H195 1237 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 GBA3Q9H227 469 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 RAD21L1Q9H4I0 556 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 CAB39LQ9H9S4 337 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 PTPRHQ9HD43 1115 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 GMIPQ9P107 970 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 DAPK2Q9UIK4 370 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 MTF2Q9Y483 593 aaPredicted RBP12.39□□□□□ -0.43
CCT3-203ENST00000368258 SNX9Q9Y5X1 595 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 WDR90Q96KV7 1748 aa12.39□□□□□ -0.43
CCT3-203ENST00000368258 CNTNAP1P78357 1384 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 FNDC1Q4ZHG4 1894 aaPredicted RBP12.38□□□□□ -0.43
CCT3-203ENST00000368258 UBDO15205 165 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 AP2A1O95782 977 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 STAU1O95793 577 aaKnown RBP12.38□□□□□ -0.43
CCT3-203ENST00000368258 TFE3P19532 575 aaPredicted RBP12.38□□□□□ -0.43
CCT3-203ENST00000368258 CYP3A5P20815 502 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 MATN1P21941 496 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 DNAJB2P25686 324 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 LRPAP1P30533 357 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 EPHX2P34913 555 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 ARCN1P48444 511 aaKnown RBP12.38□□□□□ -0.43
CCT3-203ENST00000368258 KPNA2P52292 529 aaKnown RBP12.38□□□□□ -0.43
CCT3-203ENST00000368258 TNK2Q07912 1038 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 PKDCCQ504Y2 493 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 AGKQ53H12 422 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 BROXQ5VW32 411 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 SLC26A9Q7LBE3 791 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 KCNMB4Q86W47 210 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 PARP8Q8N3A8 854 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 FSTL5Q8N475 847 aaPredicted RBP12.38□□□□□ -0.43
CCT3-203ENST00000368258 PAPD5Q8NDF8 572 aaKnown RBP12.38□□□□□ -0.43
CCT3-203ENST00000368258 TRPV3Q8NET8 790 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 UBA3Q8TBC4 463 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 NSUN6Q8TEA1 469 aaKnown RBP12.38□□□□□ -0.43
CCT3-203ENST00000368258 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCT3-203ENST00000368258 P2RY11Q96G91 374 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 VMP1Q96GC9 406 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 SH3YL1Q96HL8 342 aaPredicted RBP12.38□□□□□ -0.43
CCT3-203ENST00000368258 HEXIM2Q96MH2 286 aaKnown RBP12.38□□□□□ -0.43
CCT3-203ENST00000368258 TSPYL2Q9H2G4 693 aaPredicted RBP12.38□□□□□ -0.43
CCT3-203ENST00000368258 TBC1D13Q9NVG8 400 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 ACTR3BQ9P1U1 418 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.38□□□□□ -0.43
CCT3-203ENST00000368258 IFT80Q9P2H3 777 aaPredicted RBP12.38□□□□□ -0.43
CCT3-203ENST00000368258 TSPAN16Q9UKR8 245 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 VANGL2Q9ULK5 521 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 ERVK-11Q9UQG0 969 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 VWA7Q9Y334 891 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 AFG3L2Q9Y4W6 797 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 HES2Q9Y543 173 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 CTDP1Q9Y5B0 961 aaPredicted RBP12.38□□□□□ -0.43
CCT3-203ENST00000368258 RNF103-CHMP3A0A140T963 221 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 KDM1AO60341 852 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 MAFO75444 373 aaPredicted RBP12.38□□□□□ -0.43
CCT3-203ENST00000368258 PRKCBP05771 671 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 SLC35E2BP0CK96 405 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 GSSP48637 474 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 NPY2RP49146 381 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 SLC7A2P52569 658 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 GNA12Q03113 381 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 FOXM1Q08050 763 aa12.38□□□□□ -0.43
CCT3-203ENST00000368258 IFRD2Q12894 506 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms