RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 DOCK4Q8N1I0 1966 aa9.61□□□□□ -0.87
VTA1-201ENST00000367621 DENND4CQ5VZ89 1909 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 A0A087WUV0 522 aaPredicted RBP9.6□□□□□ -0.87
VTA1-201ENST00000367621 TCRBV9S1A1TA0A576 114 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 ALDH1A2O94788 518 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 PABPC1P11940 636 aaKnown RBP9.6□□□□□ -0.87
VTA1-201ENST00000367621 LAMP2P13473 410 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 CHRNA4P43681 627 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 SLC6A11P48066 632 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 NPY2RP49146 381 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 SERPINH1P50454 418 aaKnown RBP9.6□□□□□ -0.87
VTA1-201ENST00000367621 SLC20A2Q08357 652 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 ITKQ08881 620 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 NSUN2Q08J23 767 aaKnown RBP eCLIP9.6□□□□□ -0.87
VTA1-201ENST00000367621 CDH17Q12864 832 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 STAT4Q14765 748 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 EFTUD2Q15029 972 aaKnown RBP eCLIP9.6□□□□□ -0.87
VTA1-201ENST00000367621 DGKKQ5KSL6 1271 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 NAPEPLDQ6IQ20 393 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 NCEH1Q6PIU2 408 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 CAPN12Q6ZSI9 719 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 CYS1Q717R9 158 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 LINC00523Q86TU6 105 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 RNF135Q8IUD6 432 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 MFSD6LQ8IWD5 586 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 PHTF2Q8N3S3 785 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 NAT16Q8N8M0 369 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 SMRP1Q8NCR6 262 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 EPS8L3Q8TE67 593 aaKnown RBP9.6□□□□□ -0.87
VTA1-201ENST00000367621 FBF1Q8TES7 1133 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 TTC17Q96AE7 1141 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 STAMBPL1Q96FJ0 436 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 CFAP36Q96G28 342 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 RIPOR3Q96MK2 946 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 XPO6Q96QU8 1125 aaKnown RBP9.6□□□□□ -0.87
VTA1-201ENST00000367621 NUDCD1Q96RS6 583 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 C2orf49Q9BVC5 232 aaPredicted RBP9.6□□□□□ -0.87
VTA1-201ENST00000367621 KIFC1Q9BW19 673 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 CINPQ9BW66 212 aaPredicted RBP9.6□□□□□ -0.87
VTA1-201ENST00000367621 ROPN1BQ9BZX4 212 aaPredicted RBP9.6□□□□□ -0.87
VTA1-201ENST00000367621 EBF3Q9H4W6 596 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 ACSS3Q9H6R3 686 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 VPS37BQ9H9H4 285 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 ROPN1Q9HAT0 212 aaPredicted RBP9.6□□□□□ -0.87
VTA1-201ENST00000367621 SMYD2Q9NRG4 433 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 MOCS1Q9NZB8 636 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 OGFRQ9NZT2 677 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 NUP205Q92621 2012 aa9.6□□□□□ -0.87
VTA1-201ENST00000367621 REV3LO60673 3130 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 PDE4DIPQ5VU43 2346 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 ZCWPW2A0A1B0GU75 182 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 GOLGA6CA6NDK9 693 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 CXorf49A8MYA2 514 aaPredicted RBP9.59□□□□□ -0.87
VTA1-201ENST00000367621 ARNTLO00327 626 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 INSIG1O15503 277 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 OPA1O60313 960 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 PIAS1O75925 651 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 NEBLO76041 1014 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 CPP00450 1065 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 EPOP01588 193 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 GSTA2P09210 222 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 GOLGA6DP0CG33 693 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 ADH5P11766 374 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 SRCP12931 536 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 BMP1P13497 986 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 PGAM1P18669 254 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 CES1P23141 567 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 PRKCHP24723 683 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 ABL2P42684 1182 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 MTHFRP42898 656 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 CSNK1DP48730 415 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 STK19P49842 368 aaPredicted RBP9.59□□□□□ -0.87
VTA1-201ENST00000367621 MLLT1Q03111 559 aaPredicted RBP9.59□□□□□ -0.87
VTA1-201ENST00000367621 FRG1Q14331 258 aaKnown RBP9.59□□□□□ -0.87
VTA1-201ENST00000367621 DMC1Q14565 340 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 PDGFRLQ15198 375 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 SLC1A5Q15758 541 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 LONRF1Q17RB8 773 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 GEN1Q17RS7 908 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 SIRPB2Q5JXA9 342 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 ATXN7L2Q5T6C5 722 aaPredicted RBP9.59□□□□□ -0.87
VTA1-201ENST00000367621 NAIF1Q69YI7 327 aaPredicted RBP9.59□□□□□ -0.87
VTA1-201ENST00000367621 PTCRAQ6ISU1 281 aaPredicted RBP9.59□□□□□ -0.87
VTA1-201ENST00000367621 CES5AQ6NT32 575 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 TRMT10BQ6PF06 316 aaKnown RBP9.59□□□□□ -0.87
VTA1-201ENST00000367621 CES3Q6UWW8 571 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 KDELC2Q7Z4H8 507 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 TMEM135Q86UB9 458 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 TDRPQ86YL5 185 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 CCDC117Q8IWD4 279 aaPredicted RBP9.59□□□□□ -0.87
VTA1-201ENST00000367621 PALM2Q8IXS6 379 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 UNC5BQ8IZJ1 945 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 PRR7Q8TB68 274 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 MYLIPQ8WY64 445 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 FGF14Q92915 247 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 ATP2A3Q93084 1043 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 ELSPBP1Q96BH3 223 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 TLCD1Q96CP7 247 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 PGM2Q96G03 612 aa9.59□□□□□ -0.87
VTA1-201ENST00000367621 FEM1CQ96JP0 617 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms