RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 DNAAF5Q86Y56 855 aa15.02■□□□□ -0
CTSD-202ENST00000367196 MCOLN2Q8IZK6 566 aa15.02■□□□□ -0
CTSD-202ENST00000367196 LSMEM2Q8N112 164 aa15.02■□□□□ -0
CTSD-202ENST00000367196 HMCESQ96FZ2 354 aa15.02■□□□□ -0
CTSD-202ENST00000367196 KLF6Q99612 283 aaPredicted RBP15.02■□□□□ -0
CTSD-202ENST00000367196 IL12RB2Q99665 862 aa15.02■□□□□ -0
CTSD-202ENST00000367196 CPEB1Q9BZB8 566 aaKnown RBP15.02■□□□□ -0
CTSD-202ENST00000367196 PARVAQ9NVD7 372 aa15.02■□□□□ -0
CTSD-202ENST00000367196 SPASTQ9UBP0 616 aa15.02■□□□□ -0
CTSD-202ENST00000367196 UBA2Q9UBT2 640 aaPredicted RBP15.02■□□□□ -0
CTSD-202ENST00000367196 ITM2BQ9Y287 266 aa15.02■□□□□ -0
CTSD-202ENST00000367196 OPA1O60313 960 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 BRINP1O60477 761 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 TNFAIP3P21580 790 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 BLKP51451 505 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 NDST2P52849 883 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 RPL7AP62424 266 aaKnown RBP15.01□□□□□ -0.01
CTSD-202ENST00000367196 ACAP1Q15027 740 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 FILIP1LQ4L180 1135 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 PPP1R15BQ5SWA1 713 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 ERAP2Q6P179 960 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 PYROXD2Q8N2H3 581 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 TPCN2Q8NHX9 752 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 MAPK15Q8TD08 544 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 LMX1AQ8TE12 382 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 FGF11Q92914 225 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 CENPTQ96BT3 561 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 GRAMD1AQ96CP6 724 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 SLC13A1Q9BZW2 595 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 NOL6Q9H6R4 1146 aaKnown RBP15.01□□□□□ -0.01
CTSD-202ENST00000367196 APOBEC3BQ9UH17 382 aaKnown RBP15.01□□□□□ -0.01
CTSD-202ENST00000367196 GGT7Q9UJ14 662 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 SALL4Q9UJQ4 1053 aa15.01□□□□□ -0.01
CTSD-202ENST00000367196 ARHGAP42A6NI28 874 aa15□□□□□ -0.01
CTSD-202ENST00000367196 TMEM110-MUSTN1A8MSY1 372 aa15□□□□□ -0.01
CTSD-202ENST00000367196 NEBLO76041 1014 aa15□□□□□ -0.01
CTSD-202ENST00000367196 GIMD1P0DJR0 217 aa15□□□□□ -0.01
CTSD-202ENST00000367196 PSMA2P25787 234 aa15□□□□□ -0.01
CTSD-202ENST00000367196 HTR1BP28222 390 aa15□□□□□ -0.01
CTSD-202ENST00000367196 ZNF135P52742 658 aaPredicted RBP15□□□□□ -0.01
CTSD-202ENST00000367196 COL9A2Q14055 689 aaPredicted RBP15□□□□□ -0.01
CTSD-202ENST00000367196 NR0B2Q15466 257 aa15□□□□□ -0.01
CTSD-202ENST00000367196 TBC1D25Q3MII6 688 aa15□□□□□ -0.01
CTSD-202ENST00000367196 CDCP2Q5VXM1 449 aa15□□□□□ -0.01
CTSD-202ENST00000367196 BRAT1Q6PJG6 821 aa15□□□□□ -0.01
CTSD-202ENST00000367196 MACC1Q6ZN28 852 aa15□□□□□ -0.01
CTSD-202ENST00000367196 VPS36Q86VN1 386 aa15□□□□□ -0.01
CTSD-202ENST00000367196 AOPEPQ8N6M6 819 aa15□□□□□ -0.01
CTSD-202ENST00000367196 ATL2Q8NHH9 583 aa15□□□□□ -0.01
CTSD-202ENST00000367196 WDR48Q8TAF3 677 aa15□□□□□ -0.01
CTSD-202ENST00000367196 IFI44Q8TCB0 444 aa15□□□□□ -0.01
CTSD-202ENST00000367196 NAT6Q93015 286 aa15□□□□□ -0.01
CTSD-202ENST00000367196 ZNF641Q96N77 438 aaPredicted RBP15□□□□□ -0.01
CTSD-202ENST00000367196 TUBGCP5Q96RT8 1024 aa15□□□□□ -0.01
CTSD-202ENST00000367196 MAGEB5Q9BZ81 275 aa15□□□□□ -0.01
CTSD-202ENST00000367196 AP4E1Q9UPM8 1137 aa15□□□□□ -0.01
CTSD-202ENST00000367196 SMTNL1A8MU46 457 aa14.99□□□□□ -0.01
CTSD-202ENST00000367196 EEF2KO00418 725 aaKnown RBP14.99□□□□□ -0.01
CTSD-202ENST00000367196 SPINT1O43278 529 aa14.99□□□□□ -0.01
CTSD-202ENST00000367196 DAPK3O43293 454 aa14.99□□□□□ -0.01
CTSD-202ENST00000367196 MMP20O60882 483 aa14.99□□□□□ -0.01
CTSD-202ENST00000367196 RNF8O76064 485 aa14.99□□□□□ -0.01
CTSD-202ENST00000367196 HOXB3P14651 431 aaPredicted RBP14.99□□□□□ -0.01
CTSD-202ENST00000367196 IGFALSP35858 605 aa14.99□□□□□ -0.01
CTSD-202ENST00000367196 PEX5P50542 639 aa14.99□□□□□ -0.01
CTSD-202ENST00000367196 TYRO3Q06418 890 aa14.99□□□□□ -0.01
CTSD-202ENST00000367196 NCAPHQ15003 741 aa14.99□□□□□ -0.01
CTSD-202ENST00000367196 APTXQ7Z2E3 356 aaKnown RBP14.99□□□□□ -0.01
CTSD-202ENST00000367196 PHACTR4Q8IZ21 702 aa14.99□□□□□ -0.01
CTSD-202ENST00000367196 SCG3Q8WXD2 468 aaKnown RBP14.99□□□□□ -0.01
CTSD-202ENST00000367196 ZNF578Q96N58 590 aaPredicted RBP14.99□□□□□ -0.01
CTSD-202ENST00000367196 UBL7Q96S82 380 aaPredicted RBP14.99□□□□□ -0.01
CTSD-202ENST00000367196 BPIFA3Q9BQP9 254 aa14.99□□□□□ -0.01
CTSD-202ENST00000367196 ATP13A3Q9H7F0 1226 aa14.99□□□□□ -0.01
CTSD-202ENST00000367196 SCINQ9Y6U3 715 aa14.99□□□□□ -0.01
CTSD-202ENST00000367196 TSPAN11A1L157 253 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 LMO7DNF2Z398 122 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 TLX3O43711 291 aaPredicted RBP14.98□□□□□ -0.01
CTSD-202ENST00000367196 PRPSAP2O60256 369 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 LZTS3O60299 673 aaPredicted RBP14.98□□□□□ -0.01
CTSD-202ENST00000367196 PRAMEF11O60813 436 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 TCEA3O75764 348 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 ANXA6P08133 673 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 ATP1A3P13637 1013 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 TIMP2P16035 220 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 SERPINA4P29622 427 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 PCBP4P57723 403 aaKnown RBP14.98□□□□□ -0.01
CTSD-202ENST00000367196 PPARDQ03181 441 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 EIF2B5Q13144 721 aaKnown RBP14.98□□□□□ -0.01
CTSD-202ENST00000367196 MAMLD1Q13495 774 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 RFTN1Q14699 578 aaPredicted RBP14.98□□□□□ -0.01
CTSD-202ENST00000367196 LRRC14Q15048 493 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 ASIC2Q16515 512 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 UGP2Q16851 508 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 KLHL40Q2TBA0 621 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 DEFB133Q30KQ1 61 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 TMEM52BQ4KMG9 183 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 SOWAHCQ53LP3 525 aaPredicted RBP14.98□□□□□ -0.01
CTSD-202ENST00000367196 PRRT3Q5FWE3 981 aa14.98□□□□□ -0.01
CTSD-202ENST00000367196 LRRC73Q5JTD7 316 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms