RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 NDUFA9Q16795 377 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 PLPP4Q5VZY2 271 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 WDR59Q6PJI9 974 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 CNSTQ6PJW8 725 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 FAM183BPQ6ZVS7 135 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 GPR156Q8NFN8 814 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 OR52K1Q8NGK4 314 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 KAT5Q92993 513 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 ZNF607Q96SK3 696 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 MYOCQ99972 504 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 SLC28A3Q9HAS3 691 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 ELOVL2Q9NXB9 296 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 ING3Q9NXR8 418 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 BTBD7Q9P203 1132 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 GIMD1P0DJR0 217 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 LAG3P18627 525 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 GPR142Q7Z601 462 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 METTL21AQ8WXB1 218 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 C3orf14Q9HBI5 128 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 TMPRSS4Q9NRS4 437 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 PHF11Q9UIL8 331 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 ASF1AQ9Y294 204 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 OR6C75A6NL08 312 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 ERAL1O75616 437 aaKnown RBP15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 CCDC166P0CW27 439 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 SMAD3P84022 425 aaKnown RBP15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 PPP1R15BQ5SWA1 713 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 FAM98AQ8NCA5 519 aaKnown RBP15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 TEX47Q8TBZ9 253 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 MTMR9Q96QG7 549 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 SPHKAPQ2M3C7 1700 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 OTCP00480 354 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 MYL9P24844 172 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 TGFBR2P37173 567 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 GPD2P43304 727 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 CRYBB1P53674 252 aaPredicted RBP15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 DLG3Q92796 817 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 IDI2Q9BXS1 227 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 TOR4AQ9NXH8 423 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 ARHGAP20Q9P2F6 1191 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 LEF1Q9UJU2 399 aaPredicted RBP15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 AGO1Q9UL18 857 aaKnown RBP15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 TBC1D30Q9Y2I9 924 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 SLC27A5Q9Y2P5 690 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 MFHAS1Q9Y4C4 1052 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 CHD1O14646 1710 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 TFPIP10646 304 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 HOXC12P31275 282 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 PTGES3Q15185 160 aaKnown RBP15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 CHADLQ6NUI6 762 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 DEPDC4Q8N2C3 294 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 ATXN2LQ8WWM7 1075 aaKnown RBP15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 CRNNQ9UBG3 495 aaPredicted RBP15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 CAMSAP1Q5T5Y3 1602 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 SLC25A14O95258 325 aaPredicted RBP15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 TOB1P50616 345 aaPredicted RBP15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 TBC1D25Q3MII6 688 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 CXXC5Q7LFL8 322 aaKnown RBP15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 ADAMTSL2Q86TH1 951 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 FBXO22Q8NEZ5 403 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 MYDGFQ969H8 173 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 TLE6Q9H808 572 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 PCDHGB3Q9Y5G1 929 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 ACTL7BQ9Y614 415 aa15.81■□□□□ 0.12
NUCKS1-201ENST00000367142 ANKRD63C9JTQ0 380 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 KHDRBS3O75525 346 aaKnown RBP15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 ITPKBP27987 946 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 RPL21P46778 160 aaKnown RBP15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 IDH2P48735 452 aaKnown RBP15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 GET4Q7L5D6 327 aaPredicted RBP15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 ZCCHC9Q8N567 271 aaKnown RBP15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 ELMO3Q96BJ8 720 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 PTCH2Q9Y6C5 1203 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 ABHD14A-ACY1A0A1B0GW23 586 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 SIGLEC16A6NMB1 481 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 SCAMP3O14828 347 aaKnown RBP15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 IFNGP01579 166 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 HNRNPH1P31943 449 aaKnown RBP15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 SRP54P61011 504 aaKnown RBP15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 CRTC3Q6UUV7 619 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 NARS2Q96I59 477 aaKnown RBP15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 SEMA4AQ9H3S1 761 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 CAB39LQ9H9S4 337 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 ABI3Q9P2A4 366 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 A0A087X0B3 334 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 TMEM150BA6NC51 233 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 FFAR3O14843 346 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 GPR42O15529 346 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 CYP3A4P08684 503 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 CLUP10909 449 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 CORO7P57737 925 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 CDK16Q00536 496 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 TSC22D1Q15714 1073 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 PRAMEF19Q5SWL8 479 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 PHF10Q8WUB8 498 aaKnown RBP15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 TIFAQ96CG3 184 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 TRAPPC9Q96Q05 1148 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 NUAK2Q9H093 628 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 PHPT1Q9NRX4 125 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms