RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 WSCD1Q658N2 575 aa8.26□□□□□ -1.09
CD46-208ENST00000367042 ARHGAP36Q6ZRI8 547 aa8.26□□□□□ -1.09
CD46-208ENST00000367042 PATL1Q86TB9 770 aaKnown RBP8.26□□□□□ -1.09
CD46-208ENST00000367042 TMEM102Q8N9M5 508 aaPredicted RBP8.26□□□□□ -1.09
CD46-208ENST00000367042 RNF169Q8NCN4 708 aa8.26□□□□□ -1.09
CD46-208ENST00000367042 CENPIQ92674 756 aaPredicted RBP8.26□□□□□ -1.09
CD46-208ENST00000367042 HSFY1Q96LI6 401 aa8.26□□□□□ -1.09
CD46-208ENST00000367042 ZNF560Q96MR9 790 aa8.26□□□□□ -1.09
CD46-208ENST00000367042 SEPHS2Q99611 448 aa8.26□□□□□ -1.09
CD46-208ENST00000367042 UNC93B1Q9H1C4 597 aa8.26□□□□□ -1.09
CD46-208ENST00000367042 GBA3Q9H227 469 aa8.26□□□□□ -1.09
CD46-208ENST00000367042 SOX17Q9H6I2 414 aaPredicted RBP8.26□□□□□ -1.09
CD46-208ENST00000367042 ALG9Q9H6U8 611 aa8.26□□□□□ -1.09
CD46-208ENST00000367042 TXNRD2Q9NNW7 524 aa8.26□□□□□ -1.09
CD46-208ENST00000367042 CACNA2D2Q9NY47 1150 aa8.26□□□□□ -1.09
CD46-208ENST00000367042 UBQLN1Q9UMX0 589 aaKnown RBP8.26□□□□□ -1.09
CD46-208ENST00000367042 CDC14AQ9UNH5 594 aa8.26□□□□□ -1.09
CD46-208ENST00000367042 CLEC11AQ9Y240 323 aa8.26□□□□□ -1.09
CD46-208ENST00000367042 SOCS2O14508 198 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 HTRA2O43464 458 aaPredicted RBP8.25□□□□□ -1.09
CD46-208ENST00000367042 XPOTO43592 962 aaKnown RBP8.25□□□□□ -1.09
CD46-208ENST00000367042 NRP2O60462 931 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 PGK1P00558 417 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 ZNF23P17027 643 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 PAMP19021 973 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 CYP2B6P20813 491 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 GRM5P41594 1212 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 C1QTNF8P60827 252 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 PHEXP78562 749 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 RHDQ02161 417 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 GRIK4Q16099 956 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 VPS26BQ4G0F5 336 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 PAN2Q504Q3 1202 aaKnown RBP8.25□□□□□ -1.09
CD46-208ENST00000367042 SAMD4BQ5PRF9 694 aaKnown RBP8.25□□□□□ -1.09
CD46-208ENST00000367042 RBM20Q5T481 1227 aaKnown RBP8.25□□□□□ -1.09
CD46-208ENST00000367042 SLC27A1Q6PCB7 646 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 MOB2Q70IA6 237 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 FASTKD5Q7L8L6 764 aaKnown RBP8.25□□□□□ -1.09
CD46-208ENST00000367042 PIWIL4Q7Z3Z4 852 aaKnown RBP8.25□□□□□ -1.09
CD46-208ENST00000367042 CPNE9Q8IYJ1 553 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 LSMEM2Q8N112 164 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 KDM1BQ8NB78 822 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 MAGEE2Q8TD90 523 aaPredicted RBP8.25□□□□□ -1.09
CD46-208ENST00000367042 STYXQ8WUJ0 223 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 VPS50Q96JG6 964 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 SLC45A3Q96JT2 553 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 FAM210AQ96ND0 272 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 SPON1Q9HCB6 807 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 CASS4Q9NQ75 786 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 PLK2Q9NYY3 685 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 CRYL1Q9Y2S2 319 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 PCDHGA7Q9Y5G6 932 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 USP3Q9Y6I4 520 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 ACOT8O14734 319 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 CLOCKO15516 846 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 CPB1P15086 417 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 EDNRBP24530 442 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 ATP5F1P24539 256 aaPredicted RBP8.25□□□□□ -1.09
CD46-208ENST00000367042 PSMA4P25789 261 aaKnown RBP8.25□□□□□ -1.09
CD46-208ENST00000367042 MAP4P27816 1152 aaKnown RBP8.25□□□□□ -1.09
CD46-208ENST00000367042 CXCR3P49682 368 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 NUP107P57740 925 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 CACNB2Q08289 660 aaPredicted RBP8.25□□□□□ -1.09
CD46-208ENST00000367042 ZIK1Q3SY52 487 aaPredicted RBP8.25□□□□□ -1.09
CD46-208ENST00000367042 ARHGAP17Q68EM7 881 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 TWF2Q6IBS0 349 aaKnown RBP8.25□□□□□ -1.09
CD46-208ENST00000367042 GRAMD4Q6IC98 578 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 NOTUMQ6P988 496 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 XKR5Q6UX68 686 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 CHSY3Q70JA7 882 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 CLEC14AQ86T13 490 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 PCYOX1LQ8NBM8 494 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 OR52K2Q8NGK3 314 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 DNAJB14Q8TBM8 379 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 RDH11Q8TC12 318 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 TUBGCP3Q96CW5 907 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 TBL1YQ9BQ87 522 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 POLR1BQ9H9Y6 1135 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 TBC1D23Q9NUY8 699 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 NSMCE4AQ9NXX6 385 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 GPRC5DQ9NZD1 345 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 PTGDR2Q9Y5Y4 395 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 PTPRFP10586 1907 aa8.25□□□□□ -1.09
CD46-208ENST00000367042 A0A087WXM4 84 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 TMX2-CTNND1H3BSU7 103 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 DAB1O75553 588 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 BAIAP3O94812 1187 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 LRIG2O94898 1065 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 CHRM3P20309 590 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 KCNA5P22460 613 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 GABRB3P28472 473 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 ZNF280AP59817 542 aaPredicted RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 DPYSQ14117 519 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 SQLEQ14534 574 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 INPP5AQ14642 412 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 CYP51A1Q16850 503 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 AGAP9Q5VTM2 703 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 ZNF554Q86TJ5 538 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 LINC00523Q86TU6 105 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 ERI1Q8IV48 349 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms