RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 PFKLP17858 780 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 NDUFV2P19404 249 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 NTSR1P30989 418 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 WASP42768 502 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 ATP5OP48047 213 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 PGFP49763 221 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 ITGA8P53708 1063 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 NRG1Q02297 640 aaPredicted RBP11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 DHX9Q08211 1270 aaKnown RBP11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 TAF10Q12962 218 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 MORF4L2Q15014 288 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 CFAP58Q5T655 872 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 IZUMO3Q5VZ72 239 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 HIBCHQ6NVY1 386 aaPredicted RBP11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 PCSK4Q6UW60 755 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 C4orf22Q6V702 233 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 DBX2Q6ZNG2 339 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 RFX8Q6ZV50 586 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 GPR155Q7Z3F1 870 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 CDKL3Q8IVW4 592 aaPredicted RBP11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 UNC45BQ8IWX7 931 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 ETFBKMTQ8IXQ9 262 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 GLIS1Q8NBF1 620 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 PKNOX2Q96KN3 472 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 OLFM3Q96PB7 478 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 EPAS1Q99814 870 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 USP29Q9HBJ7 922 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 MED4Q9NPJ6 270 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 TMPRSS4Q9NRS4 437 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 OSER1Q9NX31 292 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 SMPD4Q9NXE4 827 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 TPX2Q9ULW0 747 aaKnown RBP11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 TLR6Q9Y2C9 796 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 PCDHGB2Q9Y5G2 931 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 HEY1Q9Y5J3 304 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 SLCO1B1Q9Y6L6 691 aa11.46□□□□□ -0.57
CSNK1E-202ENST00000366216 MEI4A8MW99 385 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 KCNU1A8MYU2 1149 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 PLK4O00444 970 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 TNFSF14O43557 240 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 TLX3O43711 291 aaPredicted RBP11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 RRP9O43818 475 aaKnown RBP11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 CREB3O43889 395 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 OLFM2O95897 454 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 ZSCAN5DPP0CG00 497 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 RARGP13631 454 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 RPL22P35268 128 aaKnown RBP11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 HSD17B3P37058 310 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 VPS41P49754 854 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 GDF10P55107 478 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 TPI1P60174 286 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 KCNC4Q03721 635 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 GBE1Q04446 702 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 SLC10A2Q12908 348 aaPredicted RBP11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 GPS1Q13098 491 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 MTA1Q13330 715 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 PTPRNQ16849 979 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 KCTD19Q17RG1 926 aaPredicted RBP11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 HLA-BQ31612 363 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 P3H1Q32P28 736 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 SLC45A4Q5BKX6 768 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 ACBD5Q5T8D3 534 aaPredicted RBP11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 SNX30Q5VWJ9 437 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 IL27RAQ6UWB1 636 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 LRIG3Q6UXM1 1119 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 ZC3H18Q86VM9 953 aaKnown RBP11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 RELL1Q8IUW5 271 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 ZCCHC9Q8N567 271 aaKnown RBP11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 PDZD8Q8NEN9 1154 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 DNASE2BQ8WZ79 361 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 RNF34Q969K3 372 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 P2RY11Q96G91 374 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 SLC39A13Q96H72 371 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 QKIQ96PU8 341 aaKnown RBP eCLIP11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 CDK5RAP1Q96SZ6 601 aaKnown RBP11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 ETNK2Q9NVF9 386 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 DTLQ9NZJ0 730 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 PAK5Q9P286 719 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 SFMBT1Q9UHJ3 866 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 SHOC2Q9UQ13 582 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 BTBD3Q9Y2F9 522 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 BOD1L1Q8NFC6 3051 aa11.45□□□□□ -0.58
CSNK1E-202ENST00000366216 ZNF840PA6NDX5 716 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 FAM72CH0Y354 149 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 AGPSO00116 658 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 OPA1O60313 960 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 IFNB1P01574 187 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 ETS1P14921 441 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 ERCC2P18074 760 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 PMS2P54278 862 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 SLC7A9P82251 487 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 SEMG2Q02383 582 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 PDK1Q15118 436 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 TRIP4Q15650 581 aaPredicted RBP11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 UAP1Q16222 522 aaPredicted RBP11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 PREPLQ4J6C6 727 aaPredicted RBP11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 CCDC157Q569K6 752 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 LY6G5CQ5SRR4 150 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 RNASEH2BQ5TBB1 312 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms