RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 PPARGC1AQ9UBK2 798 aaKnown RBP9.28□□□□□ -0.92
CALD1-202ENST00000361901 PRKAG3Q9UGI9 489 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 OR6C75A6NL08 312 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 E9PAM4 449 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 CCL22O00626 93 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 B4GALT3O60512 393 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 CHEK2O96017 543 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 GNRH1P01148 92 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 ENO1P06733 434 aaKnown RBP9.28□□□□□ -0.92
CALD1-202ENST00000361901 ENO2P09104 434 aaPredicted RBP9.28□□□□□ -0.92
CALD1-202ENST00000361901 TFPTP0C1Z6 253 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 ENDOUP21128 410 aaKnown RBP9.28□□□□□ -0.92
CALD1-202ENST00000361901 IL4RP24394 825 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 PPARGP37231 505 aaPredicted RBP9.28□□□□□ -0.92
CALD1-202ENST00000361901 CD86P42081 329 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 MRPS15P82914 257 aaKnown RBP9.28□□□□□ -0.92
CALD1-202ENST00000361901 EML3Q32P44 896 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 DRICH1Q6PGQ1 229 aaPredicted RBP9.28□□□□□ -0.92
CALD1-202ENST00000361901 ZCCHC23Q6ZST2 131 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 TMEM173Q86WV6 379 aaPredicted RBP9.28□□□□□ -0.92
CALD1-202ENST00000361901 PSTKQ8IV42 348 aaKnown RBP9.28□□□□□ -0.92
CALD1-202ENST00000361901 NAT8LQ8N9F0 302 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 FNDC8Q8TC99 324 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 SPPL2BQ8TCT7 592 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 GPATCH1Q9BRR8 931 aaKnown RBP9.28□□□□□ -0.92
CALD1-202ENST00000361901 FAM124BQ9H5Z6 455 aaPredicted RBP9.28□□□□□ -0.92
CALD1-202ENST00000361901 CYLDQ9NQC7 956 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 MRPL17Q9NRX2 175 aaKnown RBP9.28□□□□□ -0.92
CALD1-202ENST00000361901 C6orf203Q9P0P8 240 aaPredicted RBP9.28□□□□□ -0.92
CALD1-202ENST00000361901 VPS28Q9UK41 221 aa9.28□□□□□ -0.92
CALD1-202ENST00000361901 SMG5Q9UPR3 1016 aaKnown RBP9.28□□□□□ -0.92
CALD1-202ENST00000361901 BCLAF3A2AJT9 711 aaKnown RBP9.27□□□□□ -0.93
CALD1-202ENST00000361901 TAF4O00268 1085 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 NCAM2O15394 837 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 TEX28O15482 410 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 IRAK2O43187 625 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 USP1O94782 785 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 RHOCP08134 193 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 HDCP19113 662 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 PDAP1Q13442 181 aaKnown RBP9.27□□□□□ -0.93
CALD1-202ENST00000361901 PDK3Q15120 406 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 FASTKD1Q53R41 847 aaKnown RBP9.27□□□□□ -0.93
CALD1-202ENST00000361901 HECTD3Q5T447 861 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 UNC5AQ6ZN44 842 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 COLGALT2Q8IYK4 626 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 GABPB2Q8TAK5 448 aaPredicted RBP9.27□□□□□ -0.93
CALD1-202ENST00000361901 SEC14L1Q92503 715 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 MRPS31Q92665 395 aaKnown RBP9.27□□□□□ -0.93
CALD1-202ENST00000361901 SLCO2A1Q92959 643 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 APOL5Q9BWW9 433 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 LRRC40Q9H9A6 602 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 TBCCD1Q9NVR7 557 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 SENP1Q9P0U3 644 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 HACD1B0YJ81 288 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 MAN1A2O60476 641 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 ANXA9O76027 345 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 BGNP21810 368 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 CHN2P52757 468 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 NUP107P57740 925 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 SMAD3P84022 425 aaKnown RBP9.27□□□□□ -0.93
CALD1-202ENST00000361901 RELAQ04206 551 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 MGAT3Q09327 533 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 RNF43Q68DV7 783 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 LHX8Q68G74 356 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 KCNN1Q92952 543 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 MFSD3Q96ES6 412 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 LRGUKQ96M69 825 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 QKIQ96PU8 341 aaKnown RBP eCLIP9.27□□□□□ -0.93
CALD1-202ENST00000361901 CYP2S1Q96SQ9 504 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 EBNA1BP2Q99848 306 aaKnown RBP9.27□□□□□ -0.93
CALD1-202ENST00000361901 BTBD10Q9BSF8 475 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 SLC39A8Q9C0K1 460 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 ATP13A1Q9HD20 1204 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 ACSS2Q9NR19 701 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 CHRAC1Q9NRG0 131 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 DDX28Q9NUL7 540 aaKnown RBP9.27□□□□□ -0.93
CALD1-202ENST00000361901 BCAP29Q9UHQ4 241 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 SLC24A2Q9UI40 661 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 SPAG6O75602 509 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 PAMP19021 973 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 NSUN2Q08J23 767 aaKnown RBP eCLIP9.27□□□□□ -0.93
CALD1-202ENST00000361901 NDUFA5Q16718 116 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 TMTC4Q5T4D3 741 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 DUS1LQ6P1R4 473 aaKnown RBP9.27□□□□□ -0.93
CALD1-202ENST00000361901 PACS1Q6VY07 963 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 HEATR4Q86WZ0 1026 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 HPS1Q92902 700 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 SLC35B4Q969S0 331 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 AZIN2Q96A70 460 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 ELMO2Q96JJ3 720 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 HHIPL1Q96JK4 782 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 ZYG11BQ9C0D3 744 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 USP29Q9HBJ7 922 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 FAIMQ9NVQ4 179 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 AK5Q9Y6K8 562 aa9.27□□□□□ -0.93
CALD1-202ENST00000361901 SYN3O14994 580 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 CNTN5O94779 1100 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 PTPN3P26045 913 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 EEF1DP29692 281 aaKnown RBP9.26□□□□□ -0.93
CALD1-202ENST00000361901 CHRNA4P43681 627 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms