RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 PTGR2Q8N8N7 351 aaPredicted RBP20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 LEMD2Q8NC56 503 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 LPIN3Q9BQK8 851 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 CROTQ9UKG9 612 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 RHPN2P1A8MT19 583 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 MINDY4Q4G0A6 757 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 AFTPHQ6ULP2 937 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 GCNT7Q6ZNI0 430 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 ZBTB49Q6ZSB9 765 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 POLNQ7Z5Q5 900 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 ADCY4Q8NFM4 1077 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 HDAC10Q969S8 669 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 PTPN18Q99952 460 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 ENO4A6NNW6 628 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 ZNF37AP17032 561 aaPredicted RBP20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 CCND3P30281 292 aaPredicted RBP20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 ALG11Q2TAA5 492 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 STK40Q8N2I9 435 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 ZNF354BQ96LW1 612 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 DPEP3Q9H4B8 488 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 MCIDASD6RGH6 385 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 MATN4O95460 622 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 VIPP01282 170 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 FAM153BP0C7A2 387 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 PTENP60484 403 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 FAM153CQ494X1 144 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 PCID2Q5JVF3 399 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 GPR135Q8IZ08 494 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 CLHC1Q8NHS4 586 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 DGKEP52429 567 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 HID1Q8IV36 788 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 CDYL2Q8N8U2 506 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 HMGB4Q8WW32 186 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 C11orf49Q9H6J7 331 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 STON1Q9Y6Q2 735 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 GJA1P17302 382 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 CYP4F3Q08477 520 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 TMEM63BQ5T3F8 832 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 GPR141Q7Z602 305 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 TMPRSS11BQ86T26 416 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 OR4A15Q8NGL6 344 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 MYO19Q96H55 970 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 SLC40A1Q9NP59 571 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 SUCOQ9UBS9 1254 aaKnown RBP20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 FCF1Q9Y324 198 aaKnown RBP20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 OR2AG2A6NM03 316 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 A8MU76 341 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 RPL7AP62424 266 aaKnown RBP20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 MAML3Q96JK9 1138 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 CYP2S1Q96SQ9 504 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 CD248Q9HCU0 757 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 ARHGAP28Q9P2N2 729 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 MORC2Q9Y6X9 1032 aaPredicted RBP20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 ASTN1O14525 1302 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 VPS4BO75351 444 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 PIGNO95427 931 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 NUP62P37198 522 aaPredicted RBP20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 MRPS5P82675 430 aaKnown RBP20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 C1DQ13901 141 aaKnown RBP20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 IL17AQ16552 155 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 OTOP3Q7RTS5 596 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 CFAP206Q8IYR0 622 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 PNPT1Q8TCS8 783 aaKnown RBP20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 PMM1Q92871 262 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 SLC35C1Q96A29 364 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 KLHL25Q9H0H3 589 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 CD3EAPO15446 510 aaKnown RBP20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 UQCRBP14927 111 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 IRAK1P51617 712 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 ZCCHC10Q8TBK6 192 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 KCTD4Q8WVF5 259 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 TP53INP1Q96A56 240 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 ELOVL2Q9NXB9 296 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 ITGB5P18084 799 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 CNGA2Q16280 664 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 ZNF618Q5T7W0 954 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 SLC24A5Q71RS6 500 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 LDB1Q86U70 411 aaPredicted RBP20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 STK32CQ86UX6 486 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 MCMBPQ9BTE3 642 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 ANKRD6Q9Y2G4 727 aa20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 ARIH1Q9Y4X5 557 aaPredicted RBP20.42■□□□□ 0.86
CDC42BPB-201ENST00000361246 AFDNP55196 1824 aaKnown RBP20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 SGTAO43765 313 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 GUCY1B2O75343 617 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 CYP3A4P08684 503 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 FAM110CQ1W6H9 321 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 CCDC185Q8N715 623 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 C19orf18Q8NEA5 215 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 IFI35P80217 286 aaPredicted RBP20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 ITGB3BPQ13352 177 aaPredicted RBP20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 COL9A2Q14055 689 aaPredicted RBP20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 ELOA2Q8IYF1 753 aaPredicted RBP20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 SMPDL3BQ92485 455 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 DUSP16Q9BY84 665 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 PRRG3Q9BZD7 231 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 CAB39LQ9H9S4 337 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 NMUR1Q9HB89 426 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 PSME2Q9UL46 239 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 ATP4AP20648 1035 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms