RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 A0A096LPK6 155 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 ENTPD3O75355 529 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 ENPEPQ07075 957 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 RGS1Q08116 209 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 STOX1Q6ZVD7 989 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 NT5DC3Q86UY8 548 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 PDPRQ8NCN5 879 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 SLC6A15Q9H2J7 730 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 CCNB1IP1Q9NPC3 277 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 ATPIF1Q9UII2 106 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 RGSL1A5PLK6 1076 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 CYP4B1P13584 511 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 POU6F1Q14863 301 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 ANKRD13AQ8IZ07 590 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 DAW1Q8N136 415 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 FSTL5Q8N475 847 aaPredicted RBP13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 IGSF1Q8N6C5 1336 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 EME2A4GXA9 379 aaPredicted RBP13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 CASKO14936 926 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 SNRPB2P08579 225 aaKnown RBP13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 MARC1Q5VT66 337 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 PIWIL2Q8TC59 973 aaKnown RBP13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 CIPCQ9C0C6 399 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 NPHP4O75161 1426 aaPredicted RBP13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 NRKQ7Z2Y5 1582 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 KNL1Q8NG31 2342 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 DHRS12A0PJE2 317 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 PRAMEF22A3QJZ6 481 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 C2CD2LO14523 706 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 CD151P48509 253 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 EIF1ADQ8N9N8 165 aaKnown RBP13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 COLGALT1Q8NBJ5 622 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 ERLEC1Q96DZ1 483 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 ART5Q96L15 291 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 SERPINB11Q96P15 392 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 TCF12Q99081 682 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 ANGPT4Q9Y264 503 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 WRBO00258 174 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 POLD2P49005 469 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 ERVK-9P63128 1117 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 TTI2Q6NXR4 508 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 DEF8Q6ZN54 512 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 EGFL6Q8IUX8 553 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 ANKDD1BA6NHY2 528 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 CTSHP09668 335 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 UBA1P22314 1058 aaKnown RBP13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 SDC2P34741 201 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 RIPPLY1Q0D2K3 151 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 SQLEQ14534 574 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 MIIPQ5JXC2 388 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 MTF2Q9Y483 593 aaPredicted RBP13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 ACOX1Q15067 660 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 RNASE12Q5GAN4 147 aaKnown RBP13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 CD101Q93033 1021 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 ELL3Q9HB65 397 aaPredicted RBP13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 RPL26L1Q9UNX3 145 aaKnown RBP13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 HACD1B0YJ81 288 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 SERPINB7O75635 380 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 OR5F1O95221 314 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 S100A3P33764 101 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 METTL6Q8TCB7 284 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 NEK7Q8TDX7 302 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 TBCBQ99426 244 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 LMAN2LQ9H0V9 348 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 EXD2Q9NVH0 621 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 PREX2Q70Z35 1606 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 SRRM3A6NNA2 597 aaPredicted RBP13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 OR10H2O60403 315 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 RAMP2O60895 175 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 FGFR1P11362 822 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 FAAP100Q0VG06 881 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 ATP13A4Q4VNC1 1196 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 LCN1P1Q5VSP4 162 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 IL27RAQ6UWB1 636 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 SLC47A2Q86VL8 602 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 EFCAB3Q8N7B9 438 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 C11orf24Q96F05 449 aaPredicted RBP13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 MYH7BA7E2Y1 1941 aa13.3□□□□□ -0.28
SRGAP3-201ENST00000360413 SNAPC5O75971 98 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 ANXA5P08758 320 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 PGAM1P18669 254 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 PBLDP30039 288 aaPredicted RBP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 PLK1P53350 603 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 TPTEP56180 551 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 FAM189A2Q15884 450 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 TMC7Q7Z402 723 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 DENND6BQ8NEG7 585 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 ASB12Q8WXK4 309 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 HCN3Q9P1Z3 774 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 DGKAP23743 735 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 SCN1BQ07699 218 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 AFTPHQ6ULP2 937 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 AMIGO2Q86SJ2 522 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 TMC8Q8IU68 726 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 DNAJB14Q8TBM8 379 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 HEXDCQ8WVB3 486 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 SMARCD1Q96GM5 515 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 AFDNP55196 1824 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 ARPC4-TTLL3A0A0A6YYG9 625 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms