RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 CDK9P50750 372 aaKnown RBP17.87■□□□□ 0.45
RTN4-204ENST00000357732 SLC12A2P55011 1212 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 GEMP55040 296 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 SULT2A1Q06520 285 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 FASTKQ14296 549 aaKnown RBP17.87■□□□□ 0.45
RTN4-204ENST00000357732 REP15Q6BDI9 236 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 SLC22A9Q8IVM8 553 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 GOLM1Q8NBJ4 401 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 TXNDC5Q8NBS9 432 aaKnown RBP17.87■□□□□ 0.45
RTN4-204ENST00000357732 ATP6V1E2Q96A05 226 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 BIRC8Q96P09 236 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 ANKRD60Q9BZ19 345 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 OSBPL2Q9H1P3 480 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 TUBA8Q9NY65 449 aaPredicted RBP17.87■□□□□ 0.45
RTN4-204ENST00000357732 HSFX1Q9UBD0 423 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 CD300AQ9UGN4 299 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 YJEFN3A6XGL0 299 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 KCNU1A8MYU2 1149 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 GOLGA8TH3BQL2 631 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 CLDN5O00501 218 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 UBDO15205 165 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 SNRPB2P08579 225 aaKnown RBP17.87■□□□□ 0.45
RTN4-204ENST00000357732 RBP1P09455 135 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 MSX2P35548 267 aaPredicted RBP17.87■□□□□ 0.45
RTN4-204ENST00000357732 AVPR1AP37288 418 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 MAP3K7CLP57077 242 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 PFKPQ01813 784 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 DCTN2Q13561 401 aaKnown RBP17.87■□□□□ 0.45
RTN4-204ENST00000357732 TBC1D25Q3MII6 688 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 AGAP9Q5VTM2 703 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 C8orf82Q6P1X6 216 aaPredicted RBP17.87■□□□□ 0.45
RTN4-204ENST00000357732 CEP97Q8IW35 865 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 LZTR1Q8N653 840 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 ANKFN1Q8N957 763 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 ROPN1LQ96C74 230 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 CDCA5Q96FF9 252 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 FAM210AQ96ND0 272 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 OSMRQ99650 979 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 CCT7Q99832 543 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 SGIP1Q9BQI5 828 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 TRIM62Q9BVG3 475 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 KATNBL1Q9H079 304 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.87■□□□□ 0.45
RTN4-204ENST00000357732 KLK14Q9P0G3 267 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 PTCH2Q9Y6C5 1203 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 DYTNA2CJ06 578 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 BBIP1A8MTZ0 92 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 E7ENX8 843 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 H3BNH8 94 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 IPO13O94829 963 aaKnown RBP17.86■□□□□ 0.45
RTN4-204ENST00000357732 LRIG2O94898 1065 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 GK3PQ14409 553 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 GK5Q6ZS86 529 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 GALNT7Q86SF2 657 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 NUP93Q8N1F7 819 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 TMEM86AQ8N2M4 240 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 TRIML2Q8N7C3 387 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 CALML6Q8TD86 181 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 MOCOSQ96EN8 888 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 TSPAN17Q96FV3 270 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 IL12RB2Q99665 862 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 UPF3AQ9H1J1 476 aaKnown RBP17.86■□□□□ 0.45
RTN4-204ENST00000357732 COQ10BQ9H8M1 238 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 GOLGA2P5Q9HBQ8 144 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 TREX1Q9NSU2 369 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 ARMC1Q9NVT9 282 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 GTSE1Q9NYZ3 720 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 TMEM181Q9P2C4 612 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 PTBP2Q9UKA9 531 aaKnown RBP17.86■□□□□ 0.45
RTN4-204ENST00000357732 F7P08709 466 aaPredicted RBP17.86■□□□□ 0.45
RTN4-204ENST00000357732 SLC5A2P31639 672 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 GJA5P36382 358 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 LHX1P48742 406 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 SOX4Q06945 474 aaPredicted RBP17.86■□□□□ 0.45
RTN4-204ENST00000357732 TECRLQ5HYJ1 363 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 ELMO2Q96JJ3 720 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 MARK4Q96L34 752 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 RHOBTB2Q9BYZ6 727 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 TRPC7Q9HCX4 862 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 C8orf4Q9NR00 106 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 RNF11Q9Y3C5 154 aa17.86■□□□□ 0.45
RTN4-204ENST00000357732 C7orf72A4D263 438 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 ZNF701M0R085 212 aaPredicted RBP17.85■□□□□ 0.45
RTN4-204ENST00000357732 CDK4P11802 303 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 BMP2P12643 396 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 ARNTP27540 789 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 SLC26A3P40879 764 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 SLC1A2P43004 574 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 USP46P62068 366 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 MPP1Q00013 466 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 SLC14A2Q15849 920 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 SPATS1Q496A3 300 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 DUSP28Q4G0W2 176 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 KRT80Q6KB66 452 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 AMIGO2Q86SJ2 522 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 MFSD6LQ8IWD5 586 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 SCML4Q8N228 414 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 HEXDCQ8WVB3 486 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 LPGAT1Q92604 370 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 TKTL2Q9H0I9 626 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms