RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 AKR1A1P14550 325 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 IDO1P14902 403 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 CXCR2P25025 360 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 UGT1A5P35504 534 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 CRATP43155 626 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 FSCN1Q16658 493 aaKnown RBP12.94□□□□□ -0.34
SMC4-202ENST00000357388 ALG11Q2TAA5 492 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 RD3Q7Z3Z2 195 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 LINC00116Q8NCU8 138 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 ATL1Q8WXF7 558 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 DNAJC18Q9H819 358 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 NOL11Q9H8H0 719 aaKnown RBP12.94□□□□□ -0.34
SMC4-202ENST00000357388 SHROOM2Q13796 1616 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 CASKO14936 926 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 NTSR2O95665 410 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 BMP7P18075 431 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 ITIH1P19827 911 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 ITGA3P26006 1051 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 GABRB2P47870 512 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 THOP1P52888 689 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 BTN3A2P78410 334 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 MTAPQ13126 283 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 NT5DC1Q5TFE4 455 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 SPAG16Q8N0X2 631 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 SLC47A1Q96FL8 570 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 MED8Q96G25 268 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 CISHQ9NSE2 258 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 PBRM1Q86U86 1689 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 G3V2T6 193 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 CXCL11O14625 94 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 PRMT5O14744 637 aaPredicted RBP12.94□□□□□ -0.34
SMC4-202ENST00000357388 ZBTB14O43829 449 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 ORC5O43913 435 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 SIN3BO75182 1162 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 MAGEA2P43356 314 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 TKTL1P51854 596 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 CREMQ03060 361 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 GALNT3Q14435 633 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 PABPC1LQ4VXU2 614 aaKnown RBP12.94□□□□□ -0.34
SMC4-202ENST00000357388 PCID2Q5JVF3 399 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 FNBP1LQ5T0N5 605 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 THAP5Q7Z6K1 395 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 LPCAT1Q8NF37 534 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 SUSD6Q92537 303 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 EFHD2Q96C19 240 aaPredicted RBP12.94□□□□□ -0.34
SMC4-202ENST00000357388 CBWD1Q9BRT8 395 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 SPG21Q9NZD8 308 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 GNPTGQ9UJJ9 305 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 GRIP1Q9Y3R0 1128 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 SAMHD1Q9Y3Z3 626 aaKnown RBP12.94□□□□□ -0.34
SMC4-202ENST00000357388 SPEF1Q9Y4P9 236 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 NRKQ7Z2Y5 1582 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 NUDT14O95848 222 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 LTFP02788 710 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 CTSEP14091 401 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 ETS2P15036 469 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 RGS1Q08116 209 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 HYIQ5T013 277 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 LRRC38Q5VT99 294 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 FBXO16Q8IX29 292 aaPredicted RBP12.93□□□□□ -0.34
SMC4-202ENST00000357388 TMIEQ8NEW7 156 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 EXD2Q9NVH0 621 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 PSME2Q9UL46 239 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 SAMD4AQ9UPU9 718 aaKnown RBP12.93□□□□□ -0.34
SMC4-202ENST00000357388 H3BRB1 525 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 RGS10O43665 173 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 LYNP07948 512 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 PAEPP09466 180 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 TYMPP19971 482 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 CLK2P49760 499 aaKnown RBP12.93□□□□□ -0.34
SMC4-202ENST00000357388 SULT1C3Q6IMI6 304 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 TMPRSS11AQ6ZMR5 421 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 FAM131BQ86XD5 332 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 SCAIQ8N9R8 606 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 ACOT12Q8WYK0 555 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 HTRA1Q92743 480 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 PHF12Q96QT6 1004 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 MRPL57Q9BQC6 102 aaKnown RBP12.93□□□□□ -0.34
SMC4-202ENST00000357388 FAIM2Q9BWQ8 316 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 MTFR1LQ9H019 292 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 TUT1Q9H6E5 874 aaKnown RBP12.93□□□□□ -0.34
SMC4-202ENST00000357388 ATP13A1Q9HD20 1204 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 FAM25EA8MYX2 175 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 MPZL2O60487 215 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 MAGEC1O60732 1142 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 HLA-DQA2P01906 255 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 MED22Q15528 200 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 TCEA2Q15560 299 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 CBWD6Q4V339 395 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 PDCD4Q53EL6 469 aaKnown RBP12.93□□□□□ -0.34
SMC4-202ENST00000357388 ANXA8L1Q5VT79 327 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 AGMOQ6ZNB7 445 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 OAFQ86UD1 273 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 FAM47BQ8NA70 645 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 CD101Q93033 1021 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 ART4Q93070 314 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 ITCHQ96J02 903 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 SPACA7Q96KW9 195 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 APBA2Q99767 749 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 CPA4Q9UI42 421 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms