RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 C2CD4DB7Z1M9 353 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 POLR2EP19388 210 aaKnown RBP18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 CES1P23141 567 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 MSLNQ13421 630 aaPredicted RBP18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 SLC1A5Q15758 541 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 UNC5AQ6ZN44 842 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 SRLQ86TD4 932 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 METTL3Q86U44 580 aaKnown RBP18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 CCNJLQ8IV13 435 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 SLC25A41Q8N5S1 370 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 WFIKKN2Q8TEU8 576 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 CYB5D2Q8WUJ1 264 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 PPM1EQ8WY54 764 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 NXPE3Q969Y0 559 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 VOPP1Q96AW1 172 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 BFARQ9NZS9 450 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 VPS18Q9P253 973 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 DEC1Q9P2X7 70 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 MUC22E2RYF6 1773 aaPredicted RBP18.33■□□□□ 0.53
SMARCD3-202ENST00000356800 PRRT4C9JH25 899 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 KDSRQ06136 332 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 CDK18Q07002 472 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 NR1H3Q13133 447 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 SKIV2LQ15477 1246 aaKnown RBP18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 LONRF1Q17RB8 773 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 TNFAIP8L3Q5GJ75 292 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 SIRPB2Q5JXA9 342 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 STEAP4Q687X5 459 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 GRAMD4Q6IC98 578 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 CASC4Q6P4E1 433 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 C22orf39Q6P5X5 142 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 TDRPQ86YL5 185 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 SFTPA1Q8IWL2 248 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 OR6K2Q8NGY2 324 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 ISG20Q96AZ6 181 aaKnown RBP18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 MYO19Q96H55 970 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 NAT9Q9BTE0 207 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 CENPHQ9H3R5 247 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 ACSS3Q9H6R3 686 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 RABGEF1Q9UJ41 708 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 PCDHGC4Q9Y5F7 938 aa18.33■□□□□ 0.52
SMARCD3-202ENST00000356800 COL4A2P08572 1712 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 EXOC1LA0A1B0GW35 172 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 TLDC2A0PJX2 215 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 POLR3GO15318 223 aaPredicted RBP18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 RGS16O15492 202 aaPredicted RBP18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 ATP9BO43861 1147 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 CDH16O75309 829 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 PRLP01236 227 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 EPOP01588 193 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 CSNK1DP48730 415 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 CBX1P83916 185 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 TRAF2Q12933 501 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 RASA2Q15283 850 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 PTPRNQ16849 979 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 ITPRIPL2Q3MIP1 535 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 KCTD16Q68DU8 428 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 GPR153Q6NV75 609 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 RIBC1Q8N443 379 aaPredicted RBP18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 TLCD1Q96CP7 247 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 TDRD1Q9BXT4 1180 aaKnown RBP18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 CIPCQ9C0C6 399 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 IL22Q9GZX6 179 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 STMN4Q9H169 189 aaPredicted RBP18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 LGALS13Q9UHV8 139 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 EVLQ9UI08 416 aaPredicted RBP18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 CHKBQ9Y259 395 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 RAI2Q9Y5P3 530 aa18.32■□□□□ 0.52
SMARCD3-202ENST00000356800 TCRBV9S1A1TA0A576 114 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 C1QAP02745 245 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 FOSL2P15408 326 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 PGAM1P18669 254 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 SLCO1A2P46721 670 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 AP1S1P61966 158 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 GALNT3Q14435 633 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 POU6F1Q14863 301 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 DLG2Q15700 870 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 AAK1Q2M2I8 961 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 KLHL38Q2WGJ6 581 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 RALGPS1Q5JS13 557 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 CES3Q6UWW8 571 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 CYS1Q717R9 158 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 OR2AP1Q8NGE2 309 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 FBF1Q8TES7 1133 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 IFT43Q96FT9 208 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 FCRL3Q96P31 734 aaPredicted RBP18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 CEP44Q9C0F1 390 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 ELOVL2Q9NXB9 296 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 EURLQ9NYK6 297 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 SLC24A2Q9UI40 661 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 SMIM23A6NLE4 172 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 PIAS1O75925 651 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 NDST3O95803 873 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 IGSF6O95976 241 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 PDHA1P08559 390 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 DLDP09622 509 aaKnown RBP18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 BMP1P13497 986 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 GKP32189 559 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 STX2P32856 288 aa18.31■□□□□ 0.52
SMARCD3-202ENST00000356800 EFTUD2Q15029 972 aaKnown RBP eCLIP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms