RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 MYPNQ86TC9 1320 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 A0A1W2PQ67 120 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 DDTLA6NHG4 134 aaPredicted RBP6.51□□□□□ -1.37
UPF2-201ENST00000356352 SLC15A5A6NIM6 579 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 BTNL10A8MVZ5 291 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 DCXO43602 365 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 RECQL4O94761 1208 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 HGFP14210 728 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 TCF4P15884 667 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 KLRK1P26718 216 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 CDC25CP30307 473 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 SSTR1P30872 391 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 CHN2P52757 468 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 ARFIP1P53367 373 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 SLC12A3P55017 1021 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 RAB10P61026 200 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 MYBPC1Q00872 1141 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 ZNF844Q08AG5 666 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 CAMK1Q14012 370 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 ZNF846Q147U1 533 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 KIAA1324Q6UXG2 1013 aaKnown RBP6.51□□□□□ -1.37
UPF2-201ENST00000356352 CYP2R1Q6VVX0 501 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 B3GNT6Q6ZMB0 384 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 BTN2A1Q7KYR7 527 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 RASAL3Q86YV0 1011 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.51□□□□□ -1.37
UPF2-201ENST00000356352 ZC3H7AQ8IWR0 971 aaKnown RBP6.51□□□□□ -1.37
UPF2-201ENST00000356352 PEX5LQ8IYB4 626 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 KAT5Q92993 513 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 CNPPD1Q9BV87 410 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 C1QTNF1Q9BXJ1 281 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 IDI2Q9BXS1 227 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 RSPH9Q9H1X1 276 aaPredicted RBP6.51□□□□□ -1.37
UPF2-201ENST00000356352 DSN1Q9H410 356 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 BRD9Q9H8M2 597 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 ING4Q9UNL4 249 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.51□□□□□ -1.37
UPF2-201ENST00000356352 DERAQ9Y315 318 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 PTGES3LE9PB15 166 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 SPTLC1O15269 473 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 TBL1XO60907 577 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 TRUB2O95900 331 aaKnown RBP6.51□□□□□ -1.37
UPF2-201ENST00000356352 S100A9P06702 114 aaKnown RBP6.51□□□□□ -1.37
UPF2-201ENST00000356352 IDO1P14902 403 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 ADRA1DP25100 572 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 RAB25P57735 213 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 LPIN1Q14693 890 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 XKR6Q5GH73 641 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 TPGS1Q6ZTW0 290 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 PIWIL4Q7Z3Z4 852 aaKnown RBP6.51□□□□□ -1.37
UPF2-201ENST00000356352 SLC41A1Q8IVJ1 513 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 CYP4X1Q8N118 509 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 FIBCD1Q8N539 461 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 PIWIL2Q8TC59 973 aaKnown RBP6.51□□□□□ -1.37
UPF2-201ENST00000356352 RIT1Q92963 219 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 SLC35C1Q96A29 364 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 DNAJC18Q9H819 358 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 CAB39LQ9H9S4 337 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 EXD2Q9NVH0 621 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 ZNHIT2Q9UHR6 403 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 CLTCQ00610 1675 aaKnown RBP6.51□□□□□ -1.37
UPF2-201ENST00000356352 STX16-NPEPL1H3BU86 382 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 STX16O14662 325 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 FGF1P05230 155 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 ITGAVP06756 1048 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 PRKAR1AP10644 381 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 CCNB1P14635 433 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 PSMB4P28070 264 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 GSSP48637 474 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 PFKPQ01813 784 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 CCNIQ14094 377 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 NOMO2Q5JPE7 1267 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 RNF43Q68DV7 783 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 SERPINA13PQ6UXR4 307 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 RBFAQ8N0V3 343 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 ALLCQ8N6M5 410 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 PJA1Q8NG27 643 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 FBXO30Q8TB52 745 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 AENQ8WTP8 325 aaKnown RBP6.51□□□□□ -1.37
UPF2-201ENST00000356352 NARS2Q96I59 477 aaKnown RBP6.51□□□□□ -1.37
UPF2-201ENST00000356352 ZNF354BQ96LW1 612 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 GIT1Q9Y2X7 761 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 CEP152O94986 1710 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 NCANO14594 1321 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 NCOA3Q9Y6Q9 1424 aa6.51□□□□□ -1.37
UPF2-201ENST00000356352 OR6C75A6NL08 312 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 KCNK1O00180 336 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 SSNA1O43805 119 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 CCDC166P0CW27 439 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 CDH5P33151 784 aaPredicted RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 CAPGP40121 348 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 CXCL9Q07325 125 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 BRMS1LQ5PSV4 323 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 NAIF1Q69YI7 327 aaPredicted RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 DCLRE1AQ6PJP8 1040 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 PLPPR4Q7Z2D5 763 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 POLNQ7Z5Q5 900 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 TMC8Q8IU68 726 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 PIK3C3Q8NEB9 887 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 GRIN3AQ8TCU5 1115 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms