RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 TARM1B6A8C7 271 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 DFFAO00273 331 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 DCLK1O15075 740 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 NCK1P16333 377 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 STMN1P16949 149 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 GRM5P41594 1212 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 MAP3K7CLP57077 242 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 KIF19Q2TAC6 998 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 EPHX4Q8IUS5 362 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 BBS5Q8N3I7 341 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 RYBPQ8N488 228 aaPredicted RBP10.22□□□□□ -0.77
PTPRA-203ENST00000356147 TTC16Q8NEE8 873 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 CHST13Q8NET6 341 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 C3orf30Q96M34 536 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 GPR78Q96P69 363 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 SIK2Q9H0K1 926 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 POLR1BQ9H9Y6 1135 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 CXorf21Q9HAI6 301 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 SPAG4Q9NPE6 437 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 LTBP4Q8N2S1 1624 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 LRRC14BA6NHZ5 514 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 TRIM24O15164 1050 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 HBP1O60381 514 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 C8BP07358 591 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 SLC1A2P43004 574 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 APLP1P51693 650 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 CLCN2P51788 898 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 RAB10P61026 200 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 ESRRGP62508 458 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 PCSK7Q16549 785 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 GEN1Q17RS7 908 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 VPS26BQ4G0F5 336 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 AARS2Q5JTZ9 985 aaKnown RBP10.22□□□□□ -0.77
PTPRA-203ENST00000356147 LBX2Q6XYB7 198 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 STRADAQ7RTN6 431 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 GPR180Q86V85 440 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 LZTR1Q8N653 840 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 ZNF419Q96HQ0 510 aaPredicted RBP10.22□□□□□ -0.77
PTPRA-203ENST00000356147 SNX25Q9H3E2 840 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 SMARCAD1Q9H4L7 1026 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 LRRC4Q9HBW1 653 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 NCKIPSDQ9NZQ3 722 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 SELENONQ9NZV5 590 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 VTI1BQ9UEU0 232 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 CROTQ9UKG9 612 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 BLOC1S6Q9UL45 172 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 OAZ3Q9UMX2 235 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 TIMM13Q9Y5L4 95 aaPredicted RBP10.22□□□□□ -0.77
PTPRA-203ENST00000356147 SH3PXD2BA1X283 911 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 YJEFN3A6XGL0 299 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 DLGAP1O14490 977 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 NRP2O60462 931 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 KCNH1O95259 989 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 SNRPB2P08579 225 aaKnown RBP10.22□□□□□ -0.77
PTPRA-203ENST00000356147 ZNF182P17025 639 aaPredicted RBP10.22□□□□□ -0.77
PTPRA-203ENST00000356147 EDNRBP24530 442 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 SLC7A1P30825 629 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 CASP2P42575 452 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 RXRGP48443 463 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 CSE1LP55060 971 aaKnown RBP10.22□□□□□ -0.77
PTPRA-203ENST00000356147 GNA12Q03113 381 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 DPYSQ14117 519 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 FAM83EQ2M2I3 478 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 ZIK1Q3SY52 487 aaPredicted RBP10.22□□□□□ -0.77
PTPRA-203ENST00000356147 KCTD11Q693B1 232 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 RWDD4Q6NW29 188 aaKnown RBP10.22□□□□□ -0.77
PTPRA-203ENST00000356147 CUZD1Q86UP6 607 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 SHCBP1Q8NEM2 672 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 MED10Q9BTT4 135 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 PLGRKTQ9HBL7 147 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 DDIT4Q9NX09 232 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 SUCOQ9UBS9 1254 aaKnown RBP10.22□□□□□ -0.77
PTPRA-203ENST00000356147 USP22Q9UPT9 525 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 SH3GLB1Q9Y371 365 aa10.22□□□□□ -0.77
PTPRA-203ENST00000356147 C19orf81C9J6K1 198 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 GAS2O43903 313 aaKnown RBP10.21□□□□□ -0.77
PTPRA-203ENST00000356147 SRP72O76094 671 aaKnown RBP10.21□□□□□ -0.77
PTPRA-203ENST00000356147 SUPT7LO94864 414 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 ZBTB11O95625 1053 aaPredicted RBP10.21□□□□□ -0.77
PTPRA-203ENST00000356147 SETSIPP0DME0 302 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 TGFB3P10600 412 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 ADRA1BP35368 520 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 SLC12A2P55011 1212 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 STX5Q13190 355 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 ADRM1Q16186 407 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 FUT11Q495W5 492 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 PLPPR4Q7Z2D5 763 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 LYSMD3Q7Z3D4 306 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 TMEM126BQ8IUX1 230 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 TFAP2CQ92754 450 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 OLFM1Q99784 485 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 ADI1Q9BV57 179 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 FICDQ9BVA6 458 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 RNF39Q9H2S5 420 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 MRPL46Q9H2W6 279 aaKnown RBP10.21□□□□□ -0.77
PTPRA-203ENST00000356147 TXNRD2Q9NNW7 524 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 INIPQ9NRY2 104 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 SLC38A7Q9NVC3 462 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 FAIMQ9NVQ4 179 aa10.21□□□□□ -0.77
PTPRA-203ENST00000356147 NME4O00746 187 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms