RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 HDAC8Q9BY41 377 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 VPS45Q9NRW7 570 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 ZSCAN32Q9NX65 697 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 RSPH14Q9UHP6 348 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 CDC23Q9UJX2 597 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 A0A1W2PP55 124 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 SLC7A4O43246 635 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 PIGNO95427 931 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 IFNB1P01574 187 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 CD68P34810 354 aaPredicted RBP15.7■□□□□ 0.1
TRIM13-201ENST00000356017 COILP38432 576 aaPredicted RBP15.7■□□□□ 0.1
TRIM13-201ENST00000356017 FNTBP49356 437 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 SUOXP51687 545 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 GDF10P55107 478 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 NIPAL4Q0D2K0 466 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 PRPSAP1Q14558 356 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 FBXL19Q6PCT2 694 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 CCDC137Q6PK04 289 aaKnown RBP15.7■□□□□ 0.1
TRIM13-201ENST00000356017 C4orf22Q6V702 233 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 ERN2Q76MJ5 926 aaKnown RBP15.7■□□□□ 0.1
TRIM13-201ENST00000356017 AADATQ8N5Z0 425 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 CCDC110Q8TBZ0 833 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 GRK7Q8WTQ7 553 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 SPOCK2Q92563 424 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 VOPP1Q96AW1 172 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 RUNDC3BQ96NL0 473 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 IRF2BPLQ9H1B7 796 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 GBA3Q9H227 469 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 KCNH6Q9H252 994 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 ARIH1Q9Y4X5 557 aaPredicted RBP15.7■□□□□ 0.1
TRIM13-201ENST00000356017 PCDHGC4Q9Y5F7 938 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 PCDHGA2Q9Y5H1 932 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 SHROOM3Q8TF72 1996 aa15.7■□□□□ 0.1
TRIM13-201ENST00000356017 TTC24A2A3L6 582 aaPredicted RBP15.69■□□□□ 0.1
TRIM13-201ENST00000356017 GOLGA6CA6NDK9 693 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 GOLGA6BA6NDN3 693 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 C16orf96A6NNT2 1141 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 ESPNB1AK53 854 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 TRAFD1O14545 582 aaPredicted RBP15.69■□□□□ 0.1
TRIM13-201ENST00000356017 HTRA2O43464 458 aaPredicted RBP15.69■□□□□ 0.1
TRIM13-201ENST00000356017 GJB3O75712 270 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 ANXA9O76027 345 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 GOLGA6DP0CG33 693 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 NFKB1P19838 968 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 NFKBIAP25963 317 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 DRD3P35462 400 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 P2RY2P41231 377 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 CD86P42081 329 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 KCNJ1P48048 391 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 NEK3P51956 506 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 DMWDQ09019 674 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 PARP6Q2NL67 630 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 POM121L1PQ3SYA9 428 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 C11orf74Q86VG3 221 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 RAB7BQ96AH8 199 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 FAM131CQ96AQ9 280 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 ECHDC3Q96DC8 303 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 BTBD1Q9H0C5 482 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 SGK2Q9HBY8 427 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 GOLGA6AQ9NYA3 693 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 FAM153AQ9UHL3 310 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 CYP8B1Q9UNU6 501 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 AAR2Q9Y312 384 aaKnown RBP15.69■□□□□ 0.1
TRIM13-201ENST00000356017 RAI2Q9Y5P3 530 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 KMT2EQ8IZD2 1858 aa15.69■□□□□ 0.1
TRIM13-201ENST00000356017 TSPAN11A1L157 253 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 ZNF500O60304 480 aaPredicted RBP15.68■□□□□ 0.1
TRIM13-201ENST00000356017 MMP2P08253 660 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 XPAP23025 273 aaPredicted RBP15.68■□□□□ 0.1
TRIM13-201ENST00000356017 CD6P30203 668 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 TNNT3P45378 269 aaPredicted RBP15.68■□□□□ 0.1
TRIM13-201ENST00000356017 METAP1P53582 386 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 SKOR1P84550 965 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 CKAP4Q07065 602 aaKnown RBP15.68■□□□□ 0.1
TRIM13-201ENST00000356017 CNTN1Q12860 1018 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 MPP3Q13368 585 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 ARMC12Q5T9G4 340 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.68■□□□□ 0.1
TRIM13-201ENST00000356017 TTC7BQ86TV6 843 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 PRPF39Q86UA1 669 aaKnown RBP15.68■□□□□ 0.1
TRIM13-201ENST00000356017 NDUFAF2Q8N183 169 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 ZBTB44Q8NCP5 570 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 PDCD6IPQ8WUM4 868 aaKnown RBP15.68■□□□□ 0.1
TRIM13-201ENST00000356017 ARRDC3Q96B67 414 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 TADA1Q96BN2 335 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 LRRC45Q96CN5 670 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 RBM15Q96T37 977 aaKnown RBP eCLIP15.68■□□□□ 0.13e-6■■■■□ 20.5
TRIM13-201ENST00000356017 TDRD1Q9BXT4 1180 aaKnown RBP15.68■□□□□ 0.1
TRIM13-201ENST00000356017 NEUROG2Q9H2A3 272 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 KDM4CQ9H3R0 1056 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 PAK5Q9P286 719 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 CUL9Q8IWT3 2517 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 PDE2AO00408 941 aaPredicted RBP15.68■□□□□ 0.1
TRIM13-201ENST00000356017 GAS8O95995 478 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 ADRB3P13945 408 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 GEMP55040 296 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 RPL26P61254 145 aaKnown RBP15.68■□□□□ 0.1
TRIM13-201ENST00000356017 TRAF2Q12933 501 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 UGP2Q16851 508 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 WHAMMP3Q1A5X7 153 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms