RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 NIFKQ9BYG3 293 aaKnown RBP13.73□□□□□ -0.21
TRIM4-203ENST00000355947 FADS3Q9Y5Q0 445 aa13.73□□□□□ -0.21
TRIM4-203ENST00000355947 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.73□□□□□ -0.21
TRIM4-203ENST00000355947 KIAA1217Q5T5P2 1943 aa13.73□□□□□ -0.21
TRIM4-203ENST00000355947 DHRS12A0PJE2 317 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 LRRC14BA6NHZ5 514 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 SNX16P57768 344 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 MBTD1Q05BQ5 628 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 ADRM1Q16186 407 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 ASB9Q96DX5 294 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 PLEKHA8Q96JA3 519 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 RMI1Q9H9A7 625 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 CYP3A43Q9HB55 503 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 MAP3K20Q9NYL2 800 aaKnown RBP13.72□□□□□ -0.21
TRIM4-203ENST00000355947 PPP6CO00743 305 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 ACOT8O14734 319 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 NRP2O60462 931 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 CABYRO75952 493 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 ELK4P28324 431 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 RHDQ02161 417 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 PAN2Q504Q3 1202 aaKnown RBP13.72□□□□□ -0.21
TRIM4-203ENST00000355947 HMBOX1Q6NT76 420 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 METTL7BQ6UX53 244 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 CUZD1Q86UP6 607 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 FAM83AQ86UY5 434 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 CENPSQ8N2Z9 138 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 KLHL25Q9H0H3 589 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 EPB41L1Q9H4G0 881 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 PLEKHA5Q9HAU0 1116 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 FANCEQ9HB96 536 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 SETD4Q9NVD3 440 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 CIDEBQ9UHD4 219 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 ZCWPW2A0A1B0GU75 182 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 TRPC5OSA6NMA1 111 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 SIX3O95343 332 aaPredicted RBP13.72□□□□□ -0.21
TRIM4-203ENST00000355947 PGK1P00558 417 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 SLC35E2BP0CK96 405 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 PSMA4P25789 261 aaKnown RBP13.72□□□□□ -0.21
TRIM4-203ENST00000355947 PRDX6P30041 224 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 CDK18Q07002 472 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 SPIDRQ14159 915 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 C6orf183Q5T699 404 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 LSMEM2Q8N112 164 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 ESAMQ96AP7 390 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 TCF12Q99081 682 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 BEGAINQ9BUH8 593 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 PDZD7Q9H5P4 517 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 SACM1LQ9NTJ5 587 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 PIGVQ9NUD9 493 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 COL24A1Q17RW2 1714 aa13.72□□□□□ -0.21
TRIM4-203ENST00000355947 GREB1LQ9C091 1923 aaPredicted RBP13.71□□□□□ -0.21
TRIM4-203ENST00000355947 SH3PXD2BA1X283 911 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 ALDH1A2O94788 518 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 FASP25445 335 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 OXTRP30559 389 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 FKBP1AP62942 108 aaKnown RBP13.71□□□□□ -0.21
TRIM4-203ENST00000355947 ECT2LQ008S8 904 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 CTBSQ01459 385 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 NSUN2Q08J23 767 aaKnown RBP eCLIP13.71□□□□□ -0.21
TRIM4-203ENST00000355947 TARBP2Q15633 366 aaKnown RBP13.71□□□□□ -0.21
TRIM4-203ENST00000355947 PLA2G4EQ3MJ16 856 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 ZNF789Q5FWF6 425 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 ARHGAP36Q6ZRI8 547 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 COX4I2Q96KJ9 171 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 FAM167AQ96KS9 214 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 KCNA7Q96RP8 456 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 MUC3BQ9H195 1237 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 UNC93B1Q9H1C4 597 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 PRMT7Q9NVM4 692 aaPredicted RBP13.71□□□□□ -0.21
TRIM4-203ENST00000355947 HOXC10Q9NYD6 342 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 SLC8A2Q9UPR5 921 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 USP22Q9UPT9 525 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 MAGED1Q9Y5V3 778 aaPredicted RBP13.71□□□□□ -0.21
TRIM4-203ENST00000355947 GOLGA4Q13439 2230 aaKnown RBP13.71□□□□□ -0.21
TRIM4-203ENST00000355947 FBP2O00757 339 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 SNAP29O95721 258 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 BCL10O95999 233 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 LINC00032P0C843 101 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 BST2Q10589 180 aaKnown RBP13.71□□□□□ -0.21
TRIM4-203ENST00000355947 RAB39AQ14964 217 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 RABL3Q5HYI8 236 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 STEAP4Q687X5 459 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 C4orf22Q6V702 233 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 NCCRP1Q6ZVX7 275 aaPredicted RBP13.71□□□□□ -0.21
TRIM4-203ENST00000355947 PIWIL3Q7Z3Z3 882 aaKnown RBP13.71□□□□□ -0.21
TRIM4-203ENST00000355947 ZC3HC1Q86WB0 502 aaKnown RBP13.71□□□□□ -0.21
TRIM4-203ENST00000355947 RALGPS2Q86X27 583 aaPredicted RBP13.71□□□□□ -0.21
TRIM4-203ENST00000355947 DHRSXQ8N5I4 330 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 KDM1BQ8NB78 822 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 SLC35F5Q8WV83 523 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 C1orf50Q9BV19 199 aa13.71□□□□□ -0.21
TRIM4-203ENST00000355947 TMEM247A6NEH6 219 aa13.71□□□□□ -0.22
TRIM4-203ENST00000355947 SOWAHBA6NEL2 793 aa13.71□□□□□ -0.22
TRIM4-203ENST00000355947 ERI2A8K979 691 aaKnown RBP13.71□□□□□ -0.22
TRIM4-203ENST00000355947 AP1G1O43747 822 aa13.71□□□□□ -0.22
TRIM4-203ENST00000355947 BEST1O76090 585 aa13.71□□□□□ -0.22
TRIM4-203ENST00000355947 ZBTB7AO95365 584 aa13.71□□□□□ -0.22
TRIM4-203ENST00000355947 USP17L7P0C7H9 530 aa13.71□□□□□ -0.22
TRIM4-203ENST00000355947 PIRTP0C851 137 aa13.71□□□□□ -0.22
TRIM4-203ENST00000355947 CDH3P22223 829 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms