RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 TCEAL1Q15170 157 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 CYP51A1Q16850 503 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 LRRC8BQ6P9F7 803 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 PIGZQ86VD9 579 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 LRRC52Q8N7C0 313 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 DBF4BQ8NFT6 615 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 CSPG4P5Q96PW8 444 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 OSGEPL1Q9H4B0 414 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 DHX33Q9H6R0 707 aaKnown RBP12.43□□□□□ -0.42
COLCA1-201ENST00000355430 TJP1Q07157 1748 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 PEX10O60683 326 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 XIAPP98170 497 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 ANO7Q6IWH7 933 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 ANKRD52Q8NB46 1076 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 EBF4Q9BQW3 602 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 EBF3Q9H4W6 596 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 GIMAP4Q9NUV9 329 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 TBC1D14Q9P2M4 693 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 TUBGCP6Q96RT7 1819 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 KANSL1LA0AUZ9 987 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 APODP05090 189 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 CTSEP14091 401 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 SCNN1BP51168 640 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 ATP6AP1LQ52LC2 224 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 PCID2Q5JVF3 399 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 FAM46CQ5VWP2 391 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 PRMT9Q6P2P2 845 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 CENPLQ8N0S6 344 aaPredicted RBP12.43□□□□□ -0.42
COLCA1-201ENST00000355430 MIER2Q8N344 545 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 SNX31Q8N9S9 440 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 OSCP1Q8WVF1 389 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 MYLPFQ96A32 169 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 SCLYQ96I15 445 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 TBX10O75333 385 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 NPR3P17342 541 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 CDH2P19022 906 aaPredicted RBP12.43□□□□□ -0.42
COLCA1-201ENST00000355430 PEX2P28328 305 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 GRIA3P42263 894 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 ASPAP45381 313 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 TRPC1P48995 793 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 OGDHQ02218 1023 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 ATP1A4Q13733 1029 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 CCDC88AQ3V6T2 1871 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 CCDC92Q53HC0 331 aaPredicted RBP12.43□□□□□ -0.42
COLCA1-201ENST00000355430 MARC1Q5VT66 337 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 TRMT10BQ6PF06 316 aaKnown RBP12.43□□□□□ -0.42
COLCA1-201ENST00000355430 LCLAT1Q6UWP7 414 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 HORMAD1Q86X24 394 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 C1orf127Q8N9H9 656 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 TERB1Q8NA31 727 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 C7orf43Q8WVR3 580 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 VAT1Q99536 393 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 NDNQ99608 321 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 SCN3BQ9NY72 215 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 XPR1Q9UBH6 696 aa12.43□□□□□ -0.42
COLCA1-201ENST00000355430 PRPF19Q9UMS4 504 aaKnown RBP12.43□□□□□ -0.42
COLCA1-201ENST00000355430 MAFBQ9Y5Q3 323 aaPredicted RBP12.43□□□□□ -0.42
COLCA1-201ENST00000355430 NAV1Q8NEY1 1877 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 SERPINF2P08697 491 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 VAV1P15498 845 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 ARF4P18085 180 aaPredicted RBP12.42□□□□□ -0.42
COLCA1-201ENST00000355430 CSE1LP55060 971 aaKnown RBP12.42□□□□□ -0.42
COLCA1-201ENST00000355430 ENPEPQ07075 957 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 LIN52Q52LA3 116 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 RD3Q7Z3Z2 195 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 METTL3Q86U44 580 aaKnown RBP12.42□□□□□ -0.42
COLCA1-201ENST00000355430 SPATA17Q96L03 361 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 CHCHD3Q9NX63 227 aaKnown RBP12.42□□□□□ -0.42
COLCA1-201ENST00000355430 OR12D3Q9UGF7 316 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 ZNF112Q9UJU3 913 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 ZNF214Q9UL59 606 aaPredicted RBP12.42□□□□□ -0.42
COLCA1-201ENST00000355430 MFSD11O43934 449 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 HNRNPLP14866 589 aaKnown RBP eCLIP12.42□□□□□ -0.42
COLCA1-201ENST00000355430 TSPAN8P19075 237 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 DCTN2Q13561 401 aaKnown RBP12.42□□□□□ -0.42
COLCA1-201ENST00000355430 SQLEQ14534 574 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 CERCAMQ5T4B2 595 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 GPR158Q5T848 1215 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 AMIGO2Q86SJ2 522 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 HJURPQ8NCD3 748 aaPredicted RBP12.42□□□□□ -0.42
COLCA1-201ENST00000355430 PRKD2Q9BZL6 878 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 ADAM7Q9H2U9 754 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 ALG9Q9H6U8 611 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 PRDM16Q9HAZ2 1276 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 TRPM3Q9HCF6 1732 aaPredicted RBP12.42□□□□□ -0.42
COLCA1-201ENST00000355430 CLDN5O00501 218 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 VPS26AO75436 327 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 NFATC1O95644 943 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 IDH3AP50213 366 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 CTBP1Q13363 440 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 FRG1Q14331 258 aaKnown RBP12.42□□□□□ -0.42
COLCA1-201ENST00000355430 LZICQ8WZA0 190 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 QKIQ96PU8 341 aaKnown RBP eCLIP12.42□□□□□ -0.42
COLCA1-201ENST00000355430 NIFKQ9BYG3 293 aaKnown RBP12.42□□□□□ -0.42
COLCA1-201ENST00000355430 PSMD13Q9UNM6 376 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 CRYL1Q9Y2S2 319 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.42□□□□□ -0.42
COLCA1-201ENST00000355430 SLC18A1P54219 525 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 C21orf59P57076 290 aa12.42□□□□□ -0.42
COLCA1-201ENST00000355430 NIPA2Q8N8Q9 360 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms