RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 ZBTB22O15209 634 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 AXLP30530 894 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 TTPAP49638 278 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 ZNF135P52742 658 aaPredicted RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 SULT1C3Q6IMI6 304 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 KBTBD8Q8NFY9 601 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 ACER1Q8TDN7 264 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 KLHL32Q96NJ5 620 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 CCDC59Q9P031 241 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 DNPEPQ9ULA0 475 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 ROBO2Q9HCK4 1378 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 FAM46CQ5VWP2 391 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 TRIM40Q6P9F5 258 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 PRKAB1Q9Y478 270 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 IRGMA1A4Y4 181 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 FGF10O15520 208 aaPredicted RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 SSTR1P30872 391 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 SREBF1P36956 1147 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 MFSD10Q14728 455 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 C16orf46Q6P387 395 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 RNF19BQ6ZMZ0 732 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 ZNF571Q7Z3V5 609 aaPredicted RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 AADATQ8N5Z0 425 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 C5orf34Q96MH7 638 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 CORO1BQ9BR76 489 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 DNMT3LQ9UJW3 386 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 TRIM28Q13263 835 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 SNX20Q7Z614 316 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 AMIGO1Q86WK6 493 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 CCDC36Q8IYA8 594 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 HMX1Q9NP08 348 aaPredicted RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 ABCC13Q9NSE7 274 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 ERAL1O75616 437 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 KCNA5P22460 613 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 LSM12Q3MHD2 195 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 KCNT2Q6UVM3 1135 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 ZCCHC23Q6ZST2 131 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 L1RE1Q9UN81 338 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 TPP1O14773 563 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 SLC7A2P52569 658 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 PARP6Q2NL67 630 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 DEFB106AQ8N104 65 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 DNAJB14Q8TBM8 379 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 CCDC115Q96NT0 180 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 TBCBQ99426 244 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 MRPS23Q9Y3D9 190 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 RFXANKO14593 260 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 RGL2O15211 777 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 PIGNO95427 931 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 ARFIP1P53367 373 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 HKDC1Q2TB90 917 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 HECTD3Q5T447 861 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 EFHD2Q96C19 240 aaPredicted RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 POPDC2Q9HBU9 364 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 C12orf4Q9NQ89 552 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 TBC1D24Q9ULP9 559 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 MAGI2Q86UL8 1455 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 RGSL1A5PLK6 1076 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 PSMB4P28070 264 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 PERM1Q5SV97 790 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 ATXN2LQ8WWM7 1075 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 C8orf4Q9NR00 106 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 PFDN2Q9UHV9 154 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 CDH5P33151 784 aaPredicted RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 EML3Q32P44 896 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 TMEM63BQ5T3F8 832 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 NAIF1Q69YI7 327 aaPredicted RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 SERPINA13PQ6UXR4 307 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 B3GNT6Q6ZMB0 384 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 TTC7BQ86TV6 843 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 UBR7Q8N806 425 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 IDI2Q9BXS1 227 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 SNAP91O60641 907 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 CBX6O95503 412 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 CAP2P40123 477 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 RPL14P50914 215 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 CNSTQ6PJW8 725 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 SV2AQ7L0J3 742 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 DNERQ8NFT8 737 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 DBIP07108 87 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 SLC15A2Q16348 729 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 ZNF606Q8WXB4 792 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 SLC47A1Q96FL8 570 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 PDHXO00330 501 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 PPP1R13LQ8WUF5 828 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 ZNF184Q99676 751 aaPredicted RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 PCDHA11Q9Y5I1 949 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 FFAR3O14843 346 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 GPR42O15529 346 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 DPEP1P16444 411 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 SP100P23497 879 aaPredicted RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 IKBKEQ14164 716 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 Q4G0T1 1027 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 MCOLN2Q8IZK6 566 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 TSEN15Q8WW01 171 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 SPATA9Q9BWV2 254 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 CHMP1AQ9HD42 196 aaPredicted RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 TRIM17Q9Y577 477 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 ERVK-24P63145 666 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms