RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 SKOR2Q2VWA4 1001 aaPredicted RBP16.07■□□□□ 0.16
PDGFA-201ENST00000354513 HS1BP3Q53T59 392 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 CRTC1Q6UUV9 634 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 APTXQ7Z2E3 356 aaKnown RBP16.07■□□□□ 0.16
PDGFA-201ENST00000354513 VPS36Q86VN1 386 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 SLC35F3Q8IY50 421 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 C3orf20Q8ND61 904 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 MAPK15Q8TD08 544 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 LMX1AQ8TE12 382 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 SLC39A7Q92504 469 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 OSBPL1AQ9BXW6 950 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 TTYH3Q9C0H2 523 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 PDFQ9HBH1 243 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 ADAM22Q9P0K1 906 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 SALL4Q9UJQ4 1053 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 ENTPD2Q9Y5L3 495 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 TENM4Q6N022 2769 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 LSSP48449 732 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 DUSP3P51452 185 aaPredicted RBP16.06■□□□□ 0.16
PDGFA-201ENST00000354513 COPB1P53618 953 aaKnown RBP16.06■□□□□ 0.16
PDGFA-201ENST00000354513 PCBP4P57723 403 aaKnown RBP16.06■□□□□ 0.16
PDGFA-201ENST00000354513 RPL7AP62424 266 aaKnown RBP16.06■□□□□ 0.16
PDGFA-201ENST00000354513 OGDHQ02218 1023 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 SGCGQ13326 291 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 C1orf61Q13536 156 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 IRF4Q15306 451 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 SYCP1Q15431 976 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 CYTH1Q15438 398 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 KLHL40Q2TBA0 621 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 PHACTR4Q8IZ21 702 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 NAF1Q96HR8 494 aaKnown RBP16.06■□□□□ 0.16
PDGFA-201ENST00000354513 EXOC2Q96KP1 924 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 GDAP1L1Q96MZ0 367 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 ZNF578Q96N58 590 aaPredicted RBP16.06■□□□□ 0.16
PDGFA-201ENST00000354513 EPAS1Q99814 870 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 HSD3B7Q9H2F3 369 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 POLR1BQ9H9Y6 1135 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 FANCLQ9NW38 375 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 APOBEC3BQ9UH17 382 aaKnown RBP16.06■□□□□ 0.16
PDGFA-201ENST00000354513 FZD10Q9ULW2 581 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 COQ6Q9Y2Z9 468 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 MFHAS1Q9Y4C4 1052 aa16.06■□□□□ 0.16
PDGFA-201ENST00000354513 TSPAN11A1L157 253 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 CPED1A4D0V7 1026 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 SIGLEC16A6NMB1 481 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 WASH4PA8MWX3 477 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 RASA4BC9J798 803 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 NEMP1O14524 444 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 TPP1O14773 563 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 RASA4O43374 803 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 BUB1O43683 1085 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 PIGNO95427 931 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 STAT1P42224 750 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 NSFP46459 744 aaKnown RBP16.05■□□□□ 0.16
PDGFA-201ENST00000354513 CXADRP78310 365 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 SKOR1P84550 965 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 SERINC3Q13530 473 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 CCDC183Q5T5S1 534 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 KCTD16Q68DU8 428 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 CAVIN1Q6NZI2 390 aaKnown RBP16.05■□□□□ 0.16
PDGFA-201ENST00000354513 IGF2-ASQ6U949 168 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 MACC1Q6ZN28 852 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 GPR155Q7Z3F1 870 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 SLFN11Q7Z7L1 901 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 ZSWIM9Q86XI8 627 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 ZNF248Q8NDW4 579 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 ATXN7L3BQ96GX2 97 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 TBATAQ96M53 351 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 LGMNQ99538 433 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 SYT11Q9BT88 431 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 WRAP53Q9BUR4 548 aaKnown RBP16.05■□□□□ 0.16
PDGFA-201ENST00000354513 SELENOOQ9BVL4 669 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 DKK3Q9UBP4 350 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 IPO11Q9UI26 975 aaKnown RBP16.05■□□□□ 0.16
PDGFA-201ENST00000354513 HPCAL4Q9UM19 191 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 SATB2Q9UPW6 733 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 SSUH2Q9Y2M2 353 aa16.05■□□□□ 0.16
PDGFA-201ENST00000354513 HELZ2Q9BYK8 2649 aaKnown RBP16.05■□□□□ 0.16
PDGFA-201ENST00000354513 ZSCAN5CA6NGD5 496 aaPredicted RBP16.04■□□□□ 0.16
PDGFA-201ENST00000354513 TK2O00142 265 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 TM7SF2O76062 418 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 IGSF6O95976 241 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 EPHB2P29323 1055 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 ZNF143P52747 638 aaPredicted RBP16.04■□□□□ 0.16
PDGFA-201ENST00000354513 ADKP55263 362 aaKnown RBP16.04■□□□□ 0.16
PDGFA-201ENST00000354513 RHOAP61586 193 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 NR0B2Q15466 257 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 TMEM52BQ4KMG9 183 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 INO80DQ53TQ3 878 aaPredicted RBP16.04■□□□□ 0.16
PDGFA-201ENST00000354513 PRRT3Q5FWE3 981 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 C3orf38Q5JPI3 329 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 C6orf132Q5T0Z8 1188 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 TTC7BQ86TV6 843 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 UMODL1-AS1Q8N2C9 162 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 VCPIP1Q96JH7 1222 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 MCEEQ96PE7 176 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 LRRC19Q9H756 370 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 CPNE5Q9HCH3 593 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 TMEM63CQ9P1W3 806 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 SPASTQ9UBP0 616 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms