RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 FAM117BQ6P1L5 589 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 RNF135Q8IUD6 432 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 LRRC43Q8N309 656 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 PTCD2Q8WV60 388 aaKnown RBP15.69■□□□□ 0.1
MBD1-205ENST00000353909 WDR60Q8WVS4 1066 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 CLPTM1LQ96KA5 538 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 EXOC2Q96KP1 924 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 SMIM14Q96QK8 99 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 CLSTN3Q9BQT9 956 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 TMEM175Q9BSA9 504 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 TACO1Q9BSH4 297 aaKnown RBP15.69■□□□□ 0.1
MBD1-205ENST00000353909 MRPL9Q9BYD2 267 aaKnown RBP15.69■□□□□ 0.1
MBD1-205ENST00000353909 NACA2Q9H009 215 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 MRM3Q9HC36 420 aaKnown RBP15.69■□□□□ 0.1
MBD1-205ENST00000353909 MARCH4Q9P2E8 410 aaPredicted RBP15.69■□□□□ 0.1
MBD1-205ENST00000353909 APOBEC2Q9Y235 224 aaKnown RBP15.69■□□□□ 0.1
MBD1-205ENST00000353909 CHD5Q8TDI0 1954 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 HEATR9A2RTY3 570 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 NEMP2A6NFY4 417 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 COCHO43405 550 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 HNRNPCL1O60812 293 aaKnown RBP15.69■□□□□ 0.1
MBD1-205ENST00000353909 ATP5C1P36542 298 aaKnown RBP15.69■□□□□ 0.1
MBD1-205ENST00000353909 GRIA4P48058 902 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 CD151P48509 253 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 UGP2Q16851 508 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 PREPLQ4J6C6 727 aaPredicted RBP15.69■□□□□ 0.1
MBD1-205ENST00000353909 SWT1Q5T5J6 900 aaKnown RBP15.69■□□□□ 0.1
MBD1-205ENST00000353909 WLSQ5T9L3 541 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 FAM219BQ5XKK7 198 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 KCNV2Q8TDN2 545 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 HDAC10Q969S8 669 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 RNF38Q9H0F5 515 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 VPS45Q9NRW7 570 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 MTRRQ9UBK8 725 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 CDH23Q9H251 3354 aa15.69■□□□□ 0.1
MBD1-205ENST00000353909 ZNF840PA6NDX5 716 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 F5H5T6 163 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 DLX3O60479 287 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 PRAMEF11O60813 436 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 EFEMP2O95967 443 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 HMGA1P17096 107 aaKnown RBP15.68■□□□□ 0.1
MBD1-205ENST00000353909 HOXD9P28356 352 aaPredicted RBP15.68■□□□□ 0.1
MBD1-205ENST00000353909 RGRP47804 291 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 PARP15Q460N3 678 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 LRRC8EQ6NSJ5 796 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 OR6P1Q8NGX9 317 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 STYXQ8WUJ0 223 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 MCUR1Q96AQ8 359 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 TADA1Q96BN2 335 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 VWCEQ96DN2 955 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 PRICKLE1Q96MT3 831 aaPredicted RBP15.68■□□□□ 0.1
MBD1-205ENST00000353909 NUDCD1Q96RS6 583 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 TUBB6Q9BUF5 446 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 TTLL2Q9BWV7 592 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 OSBPL1AQ9BXW6 950 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 CWH43Q9H720 699 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 PDFQ9HBH1 243 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.68■□□□□ 0.1
MBD1-205ENST00000353909 MICAL3Q7RTP6 2002 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 LDB2O43679 373 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 ACSL4O60488 711 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 PAMP19021 973 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 PEX6Q13608 980 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 USP41Q3LFD5 358 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 ZYG11AQ6WRX3 759 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 PHTF2Q8N3S3 785 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 NSMCE1Q8WV22 266 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 HEXDCQ8WVB3 486 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 FATE1Q969F0 183 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 SPON2Q9BUD6 331 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 DNMT3LQ9UJW3 386 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 ARL5AQ9Y689 179 aa15.68■□□□□ 0.1
MBD1-205ENST00000353909 GOLGA8QA0A0J9YX86 632 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 LOC285095A0A1B0GVY8 99 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 GOLGA8OA6NCC3 632 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 C2orf78A6NCI8 922 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 GOLGA8NF8WBI6 632 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 H3BNC9 293 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 HOXA2O43364 376 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 ALOX15P16050 662 aaPredicted RBP15.67■□□□□ 0.1
MBD1-205ENST00000353909 HADHAP40939 763 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 KPNB1Q14974 876 aaKnown RBP15.67■□□□□ 0.1
MBD1-205ENST00000353909 ARL13AQ5H913 290 aaPredicted RBP15.67■□□□□ 0.1
MBD1-205ENST00000353909 BLOC1S5Q8TDH9 187 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 TBATAQ96M53 351 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 PPP1R2P1Q96PQ5 205 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 OR52B2Q96RD2 323 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 PRKD2Q9BZL6 878 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 CDH19Q9H159 772 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 WDR55Q9H6Y2 383 aaPredicted RBP15.67■□□□□ 0.1
MBD1-205ENST00000353909 PAK6Q9NQU5 681 aaPredicted RBP15.67■□□□□ 0.1
MBD1-205ENST00000353909 TAGLN3Q9UI15 199 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 MROH6A6NGR9 719 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 E9PBE3 544 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 TSPAN3O60637 253 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 KLHL41O60662 606 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 JUNP05412 331 aaKnown RBP15.67■□□□□ 0.1
MBD1-205ENST00000353909 IRF1P10914 325 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 TLE2Q04725 743 aa15.67■□□□□ 0.1
MBD1-205ENST00000353909 CSHL1Q14406 222 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms